Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm8501-201ENSMUST00000117684 432 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm15971-201ENSMUST00000119372 211 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm24343-201ENSMUST00000158708 111 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Mir6992-201ENSMUST00000183342 109 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm3605-201ENSMUST00000185858 440 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm44382-201ENSMUST00000198683 122 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm7802-201ENSMUST00000216464 262 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm24200-201ENSMUST00000082955 157 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.49□□□□□ -1.53
Trim3Q9R1R2 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm13493-201ENSMUST00000120318 493 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm13214-201ENSMUST00000122137 408 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm16260-201ENSMUST00000155141 304 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm24239-201ENSMUST00000157791 255 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm7952-201ENSMUST00000180540 984 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm27004-201ENSMUST00000183300 727 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Mir6952-201ENSMUST00000185092 61 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm21139-201ENSMUST00000186594 877 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm34768-201ENSMUST00000193884 565 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm37358-201ENSMUST00000195492 479 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm44319-201ENSMUST00000196974 93 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm42886-201ENSMUST00000199214 466 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm43033-201ENSMUST00000199682 425 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm42646-201ENSMUST00000202233 914 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm43501-201ENSMUST00000202513 107 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm43105-201ENSMUST00000202987 459 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm5990-201ENSMUST00000203126 746 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm18689-201ENSMUST00000203969 902 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm45850-201ENSMUST00000212536 338 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm36262-201ENSMUST00000223274 499 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm5229-201ENSMUST00000039375 354 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm8412-201ENSMUST00000077493 440 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm8526-201ENSMUST00000079153 475 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms