Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Upk3aQ9JKX8 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm11533-201ENSMUST00000120287 477 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm22210-201ENSMUST00000158101 144 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm24731-201ENSMUST00000158227 131 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm25445-201ENSMUST00000158996 299 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm34768-201ENSMUST00000193884 565 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm45628-201ENSMUST00000210849 274 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm45405-201ENSMUST00000211544 609 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm10709-201ENSMUST00000213318 480 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 AV026068-220ENSMUST00000224153 1147 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Mir298-201ENSMUST00000083476 82 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Gm17165-201ENSMUST00000096155 493 ntBASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upk3aQ9JKX8 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Gm11561-201ENSMUST00000117429 417 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Gm37203-201ENSMUST00000191618 385 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Gm37336-202ENSMUST00000193705 468 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Gm43033-201ENSMUST00000199682 425 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Gm4742-201ENSMUST00000200261 771 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 AC155941.3-201ENSMUST00000218476 308 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms