Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm43354-201ENSMUST00000196862 346 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm43436-201ENSMUST00000199308 147 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm43561-201ENSMUST00000199866 448 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm17834-201ENSMUST00000204322 891 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm44091-201ENSMUST00000205212 649 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm36371-201ENSMUST00000209043 1103 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 AC107663.3-201ENSMUST00000225873 601 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC6.59□□□□□ -1.36
Ddx56Q9D0R4 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ddx56Q9D0R4 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Ddx56Q9D0R4 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ddx56Q9D0R4 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.59□□□□□ -1.36
Ddx56Q9D0R4 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.59□□□□□ -1.36
Ddx56Q9D0R4 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.36
Ddx56Q9D0R4 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm26289-201ENSMUST00000104169 131 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm15181-201ENSMUST00000120142 177 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm15877-201ENSMUST00000121897 964 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm16373-201ENSMUST00000129517 303 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm25898-201ENSMUST00000158303 106 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm25904-201ENSMUST00000158491 143 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm27005-201ENSMUST00000182783 921 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm44387-201ENSMUST00000196298 145 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm43850-201ENSMUST00000202021 578 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm4374-201ENSMUST00000204929 424 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 AC123944.2-201ENSMUST00000215290 382 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm18103-201ENSMUST00000216621 779 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm19233-201ENSMUST00000219772 936 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm6841-201ENSMUST00000220602 598 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 AC154838.1-201ENSMUST00000228944 911 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm7204-201ENSMUST00000062591 600 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ddx56Q9D0R4 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms