Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Nkx6-1Q99MA9 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Mir190b-201ENSMUST00000104803 80 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm15094-201ENSMUST00000118394 1131 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm12135-201ENSMUST00000119170 466 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm11198-201ENSMUST00000119771 974 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm12044-201ENSMUST00000120335 213 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Defa-ps14-201ENSMUST00000121373 418 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm13471-201ENSMUST00000122057 433 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm26346-201ENSMUST00000157525 329 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm17154-201ENSMUST00000165748 431 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm25246-201ENSMUST00000175476 69 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm18396-201ENSMUST00000177095 361 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Mir7j-201ENSMUST00000184427 122 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm29281-201ENSMUST00000188077 381 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm28190-201ENSMUST00000189766 722 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm7142-201ENSMUST00000194232 586 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm43235-201ENSMUST00000200121 297 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm43659-201ENSMUST00000200894 628 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm43501-201ENSMUST00000202513 107 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm43897-201ENSMUST00000204019 309 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm17987-201ENSMUST00000206902 603 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm5055-201ENSMUST00000215697 581 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm35558-202ENSMUST00000221819 499 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 AC144628.1-201ENSMUST00000227943 466 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm21731-201ENSMUST00000079524 489 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm23975-201ENSMUST00000082685 106 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm25404-201ENSMUST00000082970 107 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm38090-201ENSMUST00000195733 1942 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 Gm42841-201ENSMUST00000199806 1932 ntBASIC6.42□□□□□ -1.38
Nkx6-1Q99MA9 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms