Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Rnu11-201ENSMUST00000104135 134 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm12814-201ENSMUST00000117091 846 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm14794-201ENSMUST00000118181 192 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm15126-201ENSMUST00000118631 833 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm11719-201ENSMUST00000119399 351 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm7309-201ENSMUST00000121670 581 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm14212-201ENSMUST00000122023 826 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm23674-201ENSMUST00000157473 131 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm25219-201ENSMUST00000157545 330 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm7316-201ENSMUST00000165395 445 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm9587-201ENSMUST00000172449 454 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm28594-201ENSMUST00000187022 661 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm29563-201ENSMUST00000187249 496 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm28620-201ENSMUST00000190463 439 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm36999-201ENSMUST00000192756 1046 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm18553-201ENSMUST00000194152 634 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm43689-201ENSMUST00000195951 427 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm17824-201ENSMUST00000197690 805 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm30708-201ENSMUST00000202183 312 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm32983-201ENSMUST00000208500 505 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 AC154851.1-201ENSMUST00000221591 655 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm6436-201ENSMUST00000077163 451 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm43498-201ENSMUST00000202002 1486 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.29□□□□□ -1.24
Clp1Q99LI9 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm43099-201ENSMUST00000198943 5241 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm37321-201ENSMUST00000195742 1872 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm37706-201ENSMUST00000195379 2765 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm26384-201ENSMUST00000102183 110 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm13352-201ENSMUST00000117515 262 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm14580-201ENSMUST00000119122 718 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm14506-201ENSMUST00000121165 536 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm15111-201ENSMUST00000122142 878 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms