Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm10513-201ENSMUST00000194203 6468 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm43041-201ENSMUST00000200022 2630 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm45762-201ENSMUST00000212863 2619 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Trim35Q8C006 AC127596.1-201ENSMUST00000214721 2415 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Gm525-201ENSMUST00000100619 557 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Pla2g2d-202ENSMUST00000105806 1206 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Gm11898-201ENSMUST00000117161 385 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm11514-201ENSMUST00000117670 432 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm13863-201ENSMUST00000118782 602 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm15807-201ENSMUST00000119880 1128 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Mfap5-203ENSMUST00000121656 579 ntTSL 3 BASIC8.79□□□□□ -1
Trim35Q8C006 Gm11209-201ENSMUST00000130206 431 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Mir1964-201ENSMUST00000158514 83 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Tmem95-201ENSMUST00000178597 531 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trim35Q8C006 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC8.79□□□□□ -1
Trim35Q8C006 Gm23283-201ENSMUST00000179362 110 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm27028-201ENSMUST00000182303 399 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC8.79□□□□□ -1
Trim35Q8C006 Gm8101-201ENSMUST00000192796 478 ntBASIC8.79□□□□□ -1
Trim35Q8C006 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC8.79□□□□□ -1
Trim35Q8C006 Gm43212-201ENSMUST00000198208 394 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm43542-201ENSMUST00000199505 379 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm42869-201ENSMUST00000199953 2121 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC8.79□□□□□ -1
Trim35Q8C006 Gm43919-201ENSMUST00000204303 364 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC8.79□□□□□ -1
Trim35Q8C006 AC124778.2-201ENSMUST00000215837 453 ntTSL 3 BASIC8.79□□□□□ -1
Trim35Q8C006 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC8.79□□□□□ -1
Trim35Q8C006 Gm4257-201ENSMUST00000222877 513 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm6474-201ENSMUST00000223250 699 ntBASIC8.79□□□□□ -1
Trim35Q8C006 AC163038.3-201ENSMUST00000223945 558 ntBASIC8.79□□□□□ -1
Trim35Q8C006 AC124562.1-201ENSMUST00000224673 337 ntBASIC8.79□□□□□ -1
Trim35Q8C006 AC164618.3-201ENSMUST00000224863 681 ntBASIC8.79□□□□□ -1
Trim35Q8C006 AC154627.3-201ENSMUST00000228441 334 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Cox8b-201ENSMUST00000026561 360 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Reg4-201ENSMUST00000029469 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Gm7936-201ENSMUST00000069529 375 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm10039-201ENSMUST00000081241 411 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm24928-201ENSMUST00000083399 107 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Gm25897-201ENSMUST00000083709 107 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Atp2c1-212ENSMUST00000176770 2781 ntTSL 5 BASIC8.79□□□□□ -1
Trim35Q8C006 Eif2b3-202ENSMUST00000106447 3754 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Zmym1-201ENSMUST00000055013 3001 ntAPPRIS P2 TSL 2 BASIC8.79□□□□□ -1
Trim35Q8C006 Epn2-212ENSMUST00000178202 4317 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
Trim35Q8C006 Gm43776-201ENSMUST00000199729 2914 ntBASIC8.79□□□□□ -1
Trim35Q8C006 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trim35Q8C006 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Krt39-201ENSMUST00000076948 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Slco1c1-206ENSMUST00000205214 2515 ntTSL 5 BASIC8.79□□□□□ -1
Trim35Q8C006 Supt5-201ENSMUST00000003527 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Fam227b-201ENSMUST00000110446 1858 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
Trim35Q8C006 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC8.78□□□□□ -1
Trim35Q8C006 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Ephx1-202ENSMUST00000111068 1699 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Mas1-204ENSMUST00000161747 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Mas1-208ENSMUST00000165020 1675 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trim35Q8C006 Gm21188-203ENSMUST00000224713 1669 ntAPPRIS P1 BASIC8.78□□□□□ -1
Trim35Q8C006 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC8.78□□□□□ -1
Trim35Q8C006 Gm5386-201ENSMUST00000121749 2450 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gm44679-201ENSMUST00000207202 2908 ntBASIC8.78□□□□□ -1
Trim35Q8C006 AC160118.1-201ENSMUST00000214497 2457 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Prr5l-209ENSMUST00000163762 4159 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trim35Q8C006 Fignl1-206ENSMUST00000171080 2844 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Trim35Q8C006 Gm45025-201ENSMUST00000206043 2389 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Tmem229b-204ENSMUST00000174072 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Glt8d1-202ENSMUST00000168584 1498 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Hpx-201ENSMUST00000033185 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Acvr1-204ENSMUST00000112601 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Rps6ka1-206ENSMUST00000168974 2982 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC8.78□□□□□ -1
Trim35Q8C006 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Gm42933-201ENSMUST00000196547 2069 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Stmn2-201ENSMUST00000029002 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
Trim35Q8C006 Ckap2l-201ENSMUST00000052708 3137 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Gm12220-201ENSMUST00000118476 172 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gm11881-201ENSMUST00000119408 572 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gm13932-201ENSMUST00000120873 610 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gm14425-201ENSMUST00000121240 606 ntBASIC8.78□□□□□ -1
Trim35Q8C006 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Gm22814-201ENSMUST00000157452 104 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gm23538-201ENSMUST00000157535 101 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gm23411-201ENSMUST00000157988 62 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gm23021-201ENSMUST00000158765 169 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gm17359-201ENSMUST00000164216 778 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
Trim35Q8C006 Gm3027-201ENSMUST00000167579 451 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gm3104-201ENSMUST00000171004 473 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms