Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm12322-201ENSMUST00000121605 389 ntBASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Gm24731-201ENSMUST00000158227 131 ntBASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Gm8032-201ENSMUST00000171009 574 ntBASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Gm38097-201ENSMUST00000192936 439 ntBASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Gm31166-201ENSMUST00000209326 288 ntBASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Gm45628-201ENSMUST00000210849 274 ntBASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Mir298-201ENSMUST00000083476 82 ntBASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Gm23795-201ENSMUST00000084006 137 ntBASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm5073-201ENSMUST00000118222 820 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm7309-201ENSMUST00000121670 581 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm23280-201ENSMUST00000157905 139 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm27679-201ENSMUST00000184612 84 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm28640-201ENSMUST00000190918 550 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm37024-201ENSMUST00000192224 868 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm34768-201ENSMUST00000193884 565 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm20786-201ENSMUST00000212649 436 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Upf3bQ3ULL6 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm13013-201ENSMUST00000119087 523 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm14106-201ENSMUST00000119382 438 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm12813-201ENSMUST00000119615 902 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm26069-201ENSMUST00000157497 277 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm24692-201ENSMUST00000157761 146 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm25459-201ENSMUST00000157953 114 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm18343-201ENSMUST00000172802 604 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm18199-201ENSMUST00000173820 835 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm42581-201ENSMUST00000201774 966 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm7990-201ENSMUST00000212126 593 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms