Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm25748-201ENSMUST00000175487 70 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm5734-201ENSMUST00000189787 913 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm32308-201ENSMUST00000203053 280 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm44668-201ENSMUST00000207911 3265 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC3.8□□□□□ -1.8
PrkdcP97313 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm15357-201ENSMUST00000119160 285 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm14679-201ENSMUST00000121536 722 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm18553-201ENSMUST00000194152 634 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm37341-201ENSMUST00000194680 371 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC3.8□□□□□ -1.8
PrkdcP97313 AC154724.1-201ENSMUST00000225782 821 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 AC131997.2-201ENSMUST00000227452 362 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm5045-201ENSMUST00000027054 810 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm23511-201ENSMUST00000083084 164 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
PrkdcP97313 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PrkdcP97313 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PrkdcP97313 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Gm24403-201ENSMUST00000104616 130 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Gm11196-201ENSMUST00000119052 395 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Gm18427-201ENSMUST00000195422 515 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
PrkdcP97313 CT025552.2-201ENSMUST00000225497 317 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Cmtr1-201ENSMUST00000024816 6380 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PrkdcP97313 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC3.79□□□□□ -1.8
PrkdcP97313 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Gm45426-201ENSMUST00000209393 3672 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Gm44660-201ENSMUST00000207134 2465 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PrkdcP97313 Gm23839-201ENSMUST00000116957 109 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC3.79□□□□□ -1.8
PrkdcP97313 Gm23501-201ENSMUST00000157744 256 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Gm27754-201ENSMUST00000183340 126 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Gm9057-201ENSMUST00000198791 296 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC3.79□□□□□ -1.8
PrkdcP97313 Gm6702-201ENSMUST00000208496 471 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 AC114573.1-201ENSMUST00000224120 1210 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PrkdcP97313 Gm10705-201ENSMUST00000098980 461 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 AC105407.2-205ENSMUST00000224680 2733 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
PrkdcP97313 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC3.79□□□□□ -1.8
PrkdcP97313 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PrkdcP97313 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Gm6584-201ENSMUST00000119671 447 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC3.79□□□□□ -1.8
PrkdcP97313 Gm25665-201ENSMUST00000157695 110 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PrkdcP97313 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Gm27568-201ENSMUST00000184220 99 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Gm27551-201ENSMUST00000184258 77 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC3.79□□□□□ -1.8
PrkdcP97313 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC3.79□□□□□ -1.8
PrkdcP97313 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC3.79□□□□□ -1.8
PrkdcP97313 CT025525.4-201ENSMUST00000227728 277 ntBASIC3.79□□□□□ -1.8
PrkdcP97313 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
PrkdcP97313 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms