Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
HttP42859 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HttP42859 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC5.81□□□□□ -1.48
HttP42859 Gm20453-201ENSMUST00000173968 226 ntBASIC5.81□□□□□ -1.48
HttP42859 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.81□□□□□ -1.48
HttP42859 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HttP42859 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.81□□□□□ -1.48
HttP42859 Gm18205-201ENSMUST00000209215 841 ntBASIC5.81□□□□□ -1.48
HttP42859 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.81□□□□□ -1.48
HttP42859 AC114573.1-201ENSMUST00000224120 1210 ntBASIC5.81□□□□□ -1.48
HttP42859 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.81□□□□□ -1.48
HttP42859 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HttP42859 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HttP42859 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HttP42859 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.81□□□□□ -1.48
HttP42859 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
HttP42859 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HttP42859 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.81□□□□□ -1.48
HttP42859 Gm14158-201ENSMUST00000118409 308 ntBASIC5.81□□□□□ -1.48
HttP42859 Gm14753-201ENSMUST00000118503 246 ntBASIC5.81□□□□□ -1.48
HttP42859 Gm6584-201ENSMUST00000119671 447 ntBASIC5.81□□□□□ -1.48
HttP42859 Gm22342-201ENSMUST00000122647 298 ntBASIC5.81□□□□□ -1.48
HttP42859 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC5.81□□□□□ -1.48
HttP42859 Gm37445-201ENSMUST00000195318 242 ntBASIC5.81□□□□□ -1.48
HttP42859 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HttP42859 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.81□□□□□ -1.48
HttP42859 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.81□□□□□ -1.48
HttP42859 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HttP42859 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.81□□□□□ -1.48
HttP42859 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.81□□□□□ -1.48
HttP42859 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC5.81□□□□□ -1.48
HttP42859 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Gm23594-201ENSMUST00000104307 134 ntBASIC5.81□□□□□ -1.48
HttP42859 Gm14995-201ENSMUST00000117135 391 ntBASIC5.81□□□□□ -1.48
HttP42859 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Gm2914-201ENSMUST00000186120 328 ntBASIC5.81□□□□□ -1.48
HttP42859 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.81□□□□□ -1.48
HttP42859 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC5.81□□□□□ -1.48
HttP42859 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HttP42859 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HttP42859 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HttP42859 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.8□□□□□ -1.48
HttP42859 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
HttP42859 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.8□□□□□ -1.48
HttP42859 Mir761-201ENSMUST00000103245 76 ntBASIC5.8□□□□□ -1.48
HttP42859 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HttP42859 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HttP42859 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HttP42859 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC5.8□□□□□ -1.48
HttP42859 Gm43309-201ENSMUST00000200837 458 ntBASIC5.8□□□□□ -1.48
HttP42859 Gm44833-201ENSMUST00000208368 331 ntBASIC5.8□□□□□ -1.48
HttP42859 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC5.8□□□□□ -1.48
HttP42859 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.8□□□□□ -1.48
HttP42859 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HttP42859 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Gm27896-201ENSMUST00000175162 317 ntBASIC5.8□□□□□ -1.48
HttP42859 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Gm8614-201ENSMUST00000182528 978 ntBASIC5.8□□□□□ -1.48
HttP42859 Gm9057-201ENSMUST00000198791 296 ntBASIC5.8□□□□□ -1.48
HttP42859 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.8□□□□□ -1.48
HttP42859 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.8□□□□□ -1.48
HttP42859 Gm10705-201ENSMUST00000098980 461 ntBASIC5.8□□□□□ -1.48
HttP42859 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.8□□□□□ -1.48
HttP42859 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HttP42859 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC5.79□□□□□ -1.48
HttP42859 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 Gm15333-201ENSMUST00000118825 364 ntBASIC5.79□□□□□ -1.48
HttP42859 Gm13973-201ENSMUST00000121371 894 ntBASIC5.79□□□□□ -1.48
HttP42859 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 Gm6155-201ENSMUST00000173735 341 ntBASIC5.79□□□□□ -1.48
HttP42859 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms