Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.12□□□□□ -1.59
P20040 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.12□□□□□ -1.59
P20040 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.12□□□□□ -1.59
P20040 Gm44316-201ENSMUST00000199274 97 ntBASIC5.12□□□□□ -1.59
P20040 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.12□□□□□ -1.59
P20040 Gm44239-201ENSMUST00000204228 271 ntBASIC5.12□□□□□ -1.59
P20040 Gm44091-201ENSMUST00000205212 649 ntBASIC5.12□□□□□ -1.59
P20040 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.12□□□□□ -1.59
P20040 Gm5418-201ENSMUST00000206932 528 ntBASIC5.12□□□□□ -1.59
P20040 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.12□□□□□ -1.59
P20040 Gm18329-201ENSMUST00000215832 589 ntBASIC5.12□□□□□ -1.59
P20040 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC5.12□□□□□ -1.59
P20040 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.12□□□□□ -1.59
P20040 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.12□□□□□ -1.59
P20040 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.12□□□□□ -1.59
P20040 Gm5229-201ENSMUST00000039375 354 ntBASIC5.12□□□□□ -1.59
P20040 Gm6104-201ENSMUST00000078030 603 ntBASIC5.12□□□□□ -1.59
P20040 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
P20040 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
P20040 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
P20040 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
P20040 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
P20040 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
P20040 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
P20040 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
P20040 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
P20040 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
P20040 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
P20040 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
P20040 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.12□□□□□ -1.59
P20040 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
P20040 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
P20040 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
P20040 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.12□□□□□ -1.59
P20040 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
P20040 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
P20040 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.11□□□□□ -1.59
P20040 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
P20040 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
P20040 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
P20040 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
P20040 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
P20040 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
P20040 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.11□□□□□ -1.59
P20040 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.11□□□□□ -1.59
P20040 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
P20040 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.11□□□□□ -1.59
P20040 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
P20040 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.11□□□□□ -1.59
P20040 Gm20486-201ENSMUST00000101544 128 ntBASIC5.11□□□□□ -1.59
P20040 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.11□□□□□ -1.59
P20040 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
P20040 Gm14712-201ENSMUST00000120195 772 ntBASIC5.11□□□□□ -1.59
P20040 Gm13440-201ENSMUST00000121665 496 ntBASIC5.11□□□□□ -1.59
P20040 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.11□□□□□ -1.59
P20040 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.11□□□□□ -1.59
P20040 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.11□□□□□ -1.59
P20040 Gm24343-201ENSMUST00000158708 111 ntBASIC5.11□□□□□ -1.59
P20040 Scarna10-201ENSMUST00000158992 325 ntBASIC5.11□□□□□ -1.59
P20040 Gm22698-201ENSMUST00000175375 108 ntBASIC5.11□□□□□ -1.59
P20040 Mir7072-201ENSMUST00000184542 60 ntBASIC5.11□□□□□ -1.59
P20040 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
P20040 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.11□□□□□ -1.59
P20040 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.11□□□□□ -1.59
P20040 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
P20040 Gm6702-201ENSMUST00000208496 471 ntBASIC5.11□□□□□ -1.59
P20040 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.11□□□□□ -1.59
P20040 Gm45485-201ENSMUST00000211229 357 ntBASIC5.11□□□□□ -1.59
P20040 Gm45850-201ENSMUST00000212536 338 ntBASIC5.11□□□□□ -1.59
P20040 Gm7802-201ENSMUST00000216464 262 ntBASIC5.11□□□□□ -1.59
P20040 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.11□□□□□ -1.59
P20040 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC5.11□□□□□ -1.59
P20040 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.11□□□□□ -1.59
P20040 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC5.11□□□□□ -1.59
P20040 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.11□□□□□ -1.59
P20040 Gm18592-201ENSMUST00000221529 276 ntBASIC5.11□□□□□ -1.59
P20040 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.11□□□□□ -1.59
P20040 Gm36262-201ENSMUST00000223274 499 ntBASIC5.11□□□□□ -1.59
P20040 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.11□□□□□ -1.59
P20040 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
P20040 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
P20040 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
P20040 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
P20040 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.11□□□□□ -1.59
P20040 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
P20040 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
P20040 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
P20040 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.11□□□□□ -1.59
P20040 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC5.11□□□□□ -1.59
P20040 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
P20040 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
P20040 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
P20040 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.1□□□□□ -1.59
P20040 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
P20040 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms