Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm9429-201ENSMUST00000117804 868 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm9311-201ENSMUST00000118042 1269 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm15981-201ENSMUST00000119196 457 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm15750-201ENSMUST00000120970 616 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm15022-201ENSMUST00000122074 746 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm25556-201ENSMUST00000158077 144 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm26353-201ENSMUST00000158224 255 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm25861-201ENSMUST00000158251 109 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm26170-201ENSMUST00000158419 148 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm7651-201ENSMUST00000173398 901 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC4.62□□□□□ -1.67
Sdc1P18828 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm8993-201ENSMUST00000182182 983 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm27004-201ENSMUST00000183300 727 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm24949-201ENSMUST00000183609 215 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Sdc1P18828 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC4.62□□□□□ -1.67
Sdc1P18828 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm5735-201ENSMUST00000207053 167 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm45185-201ENSMUST00000207556 404 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm6828-201ENSMUST00000207902 1186 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm45319-201ENSMUST00000210220 318 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.62□□□□□ -1.67
Sdc1P18828 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Sdc1P18828 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm24200-201ENSMUST00000082955 157 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 n-R5s88-201ENSMUST00000083173 118 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm17199-201ENSMUST00000097296 416 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm9575-201ENSMUST00000122140 1339 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Sdc1P18828 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Sdc1P18828 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm37760-201ENSMUST00000194726 3841 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
Sdc1P18828 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Sdc1P18828 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Sdc1P18828 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Sdc1P18828 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Sdc1P18828 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sdc1P18828 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sdc1P18828 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Sdc1P18828 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm15054-201ENSMUST00000117393 281 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Atf1-ps-201ENSMUST00000120608 810 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC4.61□□□□□ -1.67
Sdc1P18828 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sdc1P18828 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC4.61□□□□□ -1.67
Sdc1P18828 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Sdc1P18828 Mir5107-201ENSMUST00000175586 88 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm18875-201ENSMUST00000188563 882 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Gm21803-201ENSMUST00000188897 693 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Gm29496-201ENSMUST00000189854 693 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Gm28567-201ENSMUST00000190270 693 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Gm6119-201ENSMUST00000193443 1206 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Gm37044-201ENSMUST00000193531 693 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Gm38369-201ENSMUST00000195101 693 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Gm5284-201ENSMUST00000199053 903 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Gm44316-201ENSMUST00000199274 97 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.61□□□□□ -1.67
Sdc1P18828 Gm4556-201ENSMUST00000217808 355 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC4.61□□□□□ -1.67
Sdc1P18828 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC4.61□□□□□ -1.67
Sdc1P18828 AC147245.1-201ENSMUST00000223294 677 ntBASIC4.61□□□□□ -1.67
Sdc1P18828 Gm24207-201ENSMUST00000082781 108 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms