Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Gm43588-201ENSMUST00000201862 2298 ntBASIC4.7□□□□□ -1.66
CfdP03953 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CfdP03953 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CfdP03953 Gm42702-201ENSMUST00000199515 4217 ntBASIC4.7□□□□□ -1.66
CfdP03953 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CfdP03953 Gm11971-201ENSMUST00000117715 288 ntBASIC4.7□□□□□ -1.66
CfdP03953 Gm14115-201ENSMUST00000119242 482 ntBASIC4.7□□□□□ -1.66
CfdP03953 Gm13924-201ENSMUST00000119899 486 ntBASIC4.7□□□□□ -1.66
CfdP03953 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC4.7□□□□□ -1.66
CfdP03953 Mir6769b-201ENSMUST00000184793 60 ntBASIC4.7□□□□□ -1.66
CfdP03953 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CfdP03953 Gm37135-201ENSMUST00000192652 534 ntBASIC4.7□□□□□ -1.66
CfdP03953 Gm37030-201ENSMUST00000194254 295 ntBASIC4.7□□□□□ -1.66
CfdP03953 Gm42646-201ENSMUST00000202233 914 ntBASIC4.7□□□□□ -1.66
CfdP03953 Gm19182-201ENSMUST00000207139 577 ntBASIC4.7□□□□□ -1.66
CfdP03953 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CfdP03953 Gm5087-204ENSMUST00000225820 645 ntBASIC4.7□□□□□ -1.66
CfdP03953 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CfdP03953 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CfdP03953 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CfdP03953 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
CfdP03953 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
CfdP03953 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CfdP03953 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CfdP03953 Gm23054-201ENSMUST00000082804 162 ntBASIC4.7□□□□□ -1.66
CfdP03953 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.7□□□□□ -1.66
CfdP03953 n-R5s69-201ENSMUST00000083872 119 ntBASIC4.7□□□□□ -1.66
CfdP03953 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.7□□□□□ -1.66
CfdP03953 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.7□□□□□ -1.66
CfdP03953 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CfdP03953 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CfdP03953 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CfdP03953 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
CfdP03953 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.7□□□□□ -1.66
CfdP03953 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CfdP03953 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CfdP03953 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CfdP03953 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CfdP03953 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CfdP03953 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CfdP03953 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CfdP03953 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CfdP03953 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CfdP03953 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CfdP03953 Gm25916-201ENSMUST00000104263 131 ntBASIC4.69□□□□□ -1.66
CfdP03953 Gm9506-201ENSMUST00000118516 320 ntBASIC4.69□□□□□ -1.66
CfdP03953 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC4.69□□□□□ -1.66
CfdP03953 Gm14054-201ENSMUST00000120744 704 ntBASIC4.69□□□□□ -1.66
CfdP03953 Gm2986-201ENSMUST00000121603 382 ntBASIC4.69□□□□□ -1.66
CfdP03953 Gm15877-201ENSMUST00000121897 964 ntBASIC4.69□□□□□ -1.66
CfdP03953 Gm13214-201ENSMUST00000122137 408 ntBASIC4.69□□□□□ -1.66
CfdP03953 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CfdP03953 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CfdP03953 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CfdP03953 Gm26069-201ENSMUST00000157497 277 ntBASIC4.69□□□□□ -1.66
CfdP03953 Gm15970-201ENSMUST00000160623 834 ntBASIC4.69□□□□□ -1.66
CfdP03953 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CfdP03953 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC4.69□□□□□ -1.66
CfdP03953 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC4.69□□□□□ -1.66
CfdP03953 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC4.69□□□□□ -1.66
CfdP03953 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC4.69□□□□□ -1.66
CfdP03953 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC4.69□□□□□ -1.66
CfdP03953 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC4.69□□□□□ -1.66
CfdP03953 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC4.69□□□□□ -1.66
CfdP03953 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC4.69□□□□□ -1.66
CfdP03953 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC4.69□□□□□ -1.66
CfdP03953 Gm26557-201ENSMUST00000180756 493 ntBASIC4.69□□□□□ -1.66
CfdP03953 Rps12l1-201ENSMUST00000183090 399 ntBASIC4.69□□□□□ -1.66
CfdP03953 Gm27148-201ENSMUST00000185086 160 ntBASIC4.69□□□□□ -1.66
CfdP03953 Gm43063-201ENSMUST00000198198 1081 ntBASIC4.69□□□□□ -1.66
CfdP03953 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CfdP03953 Gm2287-202ENSMUST00000199619 1000 ntBASIC4.69□□□□□ -1.66
CfdP03953 Gm18482-201ENSMUST00000202405 760 ntBASIC4.69□□□□□ -1.66
CfdP03953 Gm44712-201ENSMUST00000206250 1076 ntBASIC4.69□□□□□ -1.66
CfdP03953 Gm31166-201ENSMUST00000209326 288 ntBASIC4.69□□□□□ -1.66
CfdP03953 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.69□□□□□ -1.66
CfdP03953 AC152394.2-202ENSMUST00000228503 1064 ntBASIC4.69□□□□□ -1.66
CfdP03953 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CfdP03953 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.69□□□□□ -1.66
CfdP03953 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CfdP03953 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CfdP03953 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CfdP03953 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC4.69□□□□□ -1.66
CfdP03953 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CfdP03953 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 118.3 ms