Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Scarna13-201ENSMUST00000158164 275 ntBASIC6.9□□□□□ -1.31
Col4a1P02463 Gm23700-201ENSMUST00000158842 102 ntBASIC6.9□□□□□ -1.31
Col4a1P02463 Gm6872-201ENSMUST00000165001 700 ntBASIC6.9□□□□□ -1.31
Col4a1P02463 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Col4a1P02463 Gm43436-201ENSMUST00000199308 147 ntBASIC6.9□□□□□ -1.31
Col4a1P02463 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
Col4a1P02463 Gm2961-201ENSMUST00000211074 772 ntBASIC6.9□□□□□ -1.31
Col4a1P02463 Gm18904-201ENSMUST00000218756 329 ntBASIC6.9□□□□□ -1.31
Col4a1P02463 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC6.9□□□□□ -1.31
Col4a1P02463 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Col4a1P02463 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col4a1P02463 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col4a1P02463 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.89□□□□□ -1.31
Col4a1P02463 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Col4a1P02463 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Col4a1P02463 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col4a1P02463 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col4a1P02463 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col4a1P02463 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col4a1P02463 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col4a1P02463 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col4a1P02463 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col4a1P02463 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Col4a1P02463 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col4a1P02463 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.89□□□□□ -1.31
Col4a1P02463 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC6.89□□□□□ -1.31
Col4a1P02463 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.89□□□□□ -1.31
Col4a1P02463 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col4a1P02463 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Col4a1P02463 Gm20549-201ENSMUST00000174804 429 ntBASIC6.89□□□□□ -1.31
Col4a1P02463 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col4a1P02463 Mrgpra14-201ENSMUST00000189782 913 ntBASIC6.89□□□□□ -1.31
Col4a1P02463 Supt4b-201ENSMUST00000214434 351 ntBASIC6.89□□□□□ -1.31
Col4a1P02463 Gm18329-201ENSMUST00000215832 589 ntBASIC6.89□□□□□ -1.31
Col4a1P02463 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col4a1P02463 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.89□□□□□ -1.31
Col4a1P02463 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col4a1P02463 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC6.89□□□□□ -1.31
Col4a1P02463 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col4a1P02463 Gm6104-201ENSMUST00000078030 603 ntBASIC6.89□□□□□ -1.31
Col4a1P02463 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col4a1P02463 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col4a1P02463 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col4a1P02463 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.88□□□□□ -1.31
Col4a1P02463 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a1P02463 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Col4a1P02463 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.88□□□□□ -1.31
Col4a1P02463 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Col4a1P02463 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Col4a1P02463 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a1P02463 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a1P02463 Gm11227-201ENSMUST00000119774 471 ntBASIC6.88□□□□□ -1.31
Col4a1P02463 Gm14998-201ENSMUST00000120502 495 ntBASIC6.88□□□□□ -1.31
Col4a1P02463 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a1P02463 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.88□□□□□ -1.31
Col4a1P02463 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC6.88□□□□□ -1.31
Col4a1P02463 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a1P02463 Gm29474-201ENSMUST00000187688 379 ntBASIC6.88□□□□□ -1.31
Col4a1P02463 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a1P02463 Gm43712-201ENSMUST00000198020 291 ntBASIC6.88□□□□□ -1.31
Col4a1P02463 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Col4a1P02463 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.88□□□□□ -1.31
Col4a1P02463 CT010486.1-201ENSMUST00000224609 422 ntBASIC6.88□□□□□ -1.31
Col4a1P02463 AC133517.2-201ENSMUST00000226820 690 ntBASIC6.88□□□□□ -1.31
Col4a1P02463 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a1P02463 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Col4a1P02463 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a1P02463 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6.88□□□□□ -1.31
Col4a1P02463 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a1P02463 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Col4a1P02463 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a1P02463 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a1P02463 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Col4a1P02463 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
Col4a1P02463 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a1P02463 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.88□□□□□ -1.31
Col4a1P02463 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a1P02463 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a1P02463 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Col4a1P02463 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Col4a1P02463 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.87□□□□□ -1.31
Col4a1P02463 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a1P02463 Gm24265-201ENSMUST00000101833 141 ntBASIC6.87□□□□□ -1.31
Col4a1P02463 Gm15971-201ENSMUST00000119372 211 ntBASIC6.87□□□□□ -1.31
Col4a1P02463 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC6.87□□□□□ -1.31
Col4a1P02463 Gm6067-201ENSMUST00000121648 491 ntBASIC6.87□□□□□ -1.31
Col4a1P02463 Gm22122-201ENSMUST00000175147 200 ntBASIC6.87□□□□□ -1.31
Col4a1P02463 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.87□□□□□ -1.31
Col4a1P02463 Gm24407-201ENSMUST00000177864 141 ntBASIC6.87□□□□□ -1.31
Col4a1P02463 Gm9038-201ENSMUST00000203400 604 ntBASIC6.87□□□□□ -1.31
Col4a1P02463 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.87□□□□□ -1.31
Col4a1P02463 CT025616.1-201ENSMUST00000221158 412 ntBASIC6.87□□□□□ -1.31
Col4a1P02463 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Col4a1P02463 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.87□□□□□ -1.31
Col4a1P02463 Gm17791-201ENSMUST00000185660 1501 ntBASIC6.87□□□□□ -1.31
Col4a1P02463 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Col4a1P02463 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Col4a1P02463 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a1P02463 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a1P02463 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms