Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm25083-201ENSMUST00000102319 92 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm24284-201ENSMUST00000104240 142 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm26416-201ENSMUST00000104280 134 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm13265-201ENSMUST00000118090 421 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm13640-201ENSMUST00000118445 264 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm9439-201ENSMUST00000119554 973 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm13367-201ENSMUST00000119955 796 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm12044-201ENSMUST00000120335 213 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm14939-201ENSMUST00000120347 680 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 M6pr-ps-201ENSMUST00000120481 830 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm5135-201ENSMUST00000121100 573 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm16412-201ENSMUST00000121602 273 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Mup-ps22-201ENSMUST00000121611 243 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Mir1929-201ENSMUST00000158635 93 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm26025-201ENSMUST00000158655 271 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Mir1930-201ENSMUST00000158799 84 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm10177-202ENSMUST00000161698 207 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm7152-201ENSMUST00000163570 605 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm6223-201ENSMUST00000178436 871 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm4308-201ENSMUST00000179735 914 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm27001-201ENSMUST00000182252 936 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm27684-201ENSMUST00000183778 80 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm28414-201ENSMUST00000190111 294 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm29369-201ENSMUST00000190674 615 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm6057-201ENSMUST00000195927 314 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm7943-201ENSMUST00000212078 1034 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm18601-201ENSMUST00000220831 634 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 AC122393.1-201ENSMUST00000226570 319 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm10115-201ENSMUST00000076071 1228 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm23734-201ENSMUST00000083753 109 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 AC155234.1-201ENSMUST00000225610 2823 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Gm42614-201ENSMUST00000198724 1554 ntBASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
Pcdh1F7BJK1 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Pcdh1F7BJK1 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Pcdh1F7BJK1 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
Pcdh1F7BJK1 Gm37470-201ENSMUST00000193378 2798 ntBASIC5.96□□□□□ -1.45
Pcdh1F7BJK1 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Pcdh1F7BJK1 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Pcdh1F7BJK1 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Pcdh1F7BJK1 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Pcdh1F7BJK1 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm11976-201ENSMUST00000119236 295 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm12229-201ENSMUST00000120487 468 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm15586-201ENSMUST00000121218 528 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm12770-201ENSMUST00000121734 462 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms