Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Gm15754-201ENSMUST00000119191 478 ntBASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Gm14881-201ENSMUST00000120366 372 ntBASIC5.92□□□□□ -1.46
Col4a6B1AVK5 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Gm24103-201ENSMUST00000174930 77 ntBASIC5.92□□□□□ -1.46
Col4a6B1AVK5 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Gm33952-201ENSMUST00000197795 408 ntBASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Gm42452-201ENSMUST00000199749 617 ntBASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Gm9278-201ENSMUST00000205508 553 ntBASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Gm17994-201ENSMUST00000209260 533 ntBASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Mir31-201ENSMUST00000083474 106 ntBASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Gm21051-201ENSMUST00000221757 1688 ntBASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col4a6B1AVK5 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm44259-201ENSMUST00000204996 298 ntBASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm23514-201ENSMUST00000082827 130 ntBASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm28683-201ENSMUST00000187134 615 ntBASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm28840-205ENSMUST00000189320 615 ntBASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm28835-203ENSMUST00000190062 615 ntBASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm18247-201ENSMUST00000222937 601 ntBASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm15500-201ENSMUST00000071523 894 ntBASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col4a6B1AVK5 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms