Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.52□□□□□ -1.53
Ska1Q9CPV1 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Ska1Q9CPV1 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Ska1Q9CPV1 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ska1Q9CPV1 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ska1Q9CPV1 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.52□□□□□ -1.53
Ska1Q9CPV1 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm11971-201ENSMUST00000117715 288 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm7927-201ENSMUST00000118818 880 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm12262-201ENSMUST00000119915 305 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm12308-201ENSMUST00000120440 389 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm14054-201ENSMUST00000120744 704 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Mir1960-201ENSMUST00000157488 78 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm24081-201ENSMUST00000175177 125 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm26557-201ENSMUST00000180756 493 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm24949-201ENSMUST00000183609 215 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm5260-201ENSMUST00000186157 949 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm18799-201ENSMUST00000189104 913 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm4332-201ENSMUST00000196114 346 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm42708-201ENSMUST00000196332 905 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm44316-201ENSMUST00000199274 97 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm44053-201ENSMUST00000203364 929 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm30646-201ENSMUST00000207662 180 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm4587-201ENSMUST00000209135 637 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm19212-201ENSMUST00000216642 862 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm6104-201ENSMUST00000078030 603 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm23624-201ENSMUST00000082463 321 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ska1Q9CPV1 Gm37470-201ENSMUST00000193378 2798 ntBASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Gm13176-201ENSMUST00000117910 477 ntBASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC5.5□□□□□ -1.53
Ska1Q9CPV1 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms