Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm43171-201ENSMUST00000199882 291 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm7463-201ENSMUST00000201541 547 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm44675-201ENSMUST00000208188 2927 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm19196-201ENSMUST00000209258 357 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm17849-201ENSMUST00000219788 853 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 AC126685.1-201ENSMUST00000221001 121 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm25587-201ENSMUST00000082498 166 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm10221-201ENSMUST00000088299 309 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm37022-201ENSMUST00000192517 2254 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 CT025619.3-201ENSMUST00000216299 3267 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm2762-207ENSMUST00000202739 2665 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm14802-201ENSMUST00000121944 1885 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 n-R5s16-201ENSMUST00000104555 119 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm16400-201ENSMUST00000116523 1029 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm14887-201ENSMUST00000119522 663 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm14202-201ENSMUST00000120121 311 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm12438-201ENSMUST00000122034 336 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm8648-201ENSMUST00000122457 221 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm5924-201ENSMUST00000132554 871 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm2892-201ENSMUST00000145537 711 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm17217-201ENSMUST00000166613 469 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm6155-201ENSMUST00000173735 341 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm3454-201ENSMUST00000185571 412 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm43350-201ENSMUST00000196382 711 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm44909-201ENSMUST00000208756 165 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 AC153357.1-201ENSMUST00000219190 482 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 AC105407.3-201ENSMUST00000224161 648 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm13310-201ENSMUST00000120962 1381 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clp1Q99LI9 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.3□□□□□ -1.24
Clp1Q99LI9 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Clp1Q99LI9 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms