Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Vps39Q8R5L3 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm28240-201ENSMUST00000187560 2053 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm23294-201ENSMUST00000104150 164 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm13114-201ENSMUST00000117605 106 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm15400-201ENSMUST00000118944 601 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm13593-201ENSMUST00000121329 692 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm11761-201ENSMUST00000121392 445 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm12488-201ENSMUST00000122449 499 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm24741-201ENSMUST00000158857 106 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm29356-201ENSMUST00000186935 373 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm29519-201ENSMUST00000186994 398 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm44251-201ENSMUST00000204963 442 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm19033-201ENSMUST00000208516 964 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm8523-201ENSMUST00000211386 552 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm8256-203ENSMUST00000228692 591 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.81□□□□□ -1.48
Vps39Q8R5L3 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms