Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm12077-201ENSMUST00000117049 364 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm15715-201ENSMUST00000118032 283 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm8582-201ENSMUST00000164061 789 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm2959-201ENSMUST00000169844 621 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Olfr331-202ENSMUST00000170501 957 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm24303-201ENSMUST00000178237 126 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm8929-201ENSMUST00000197781 1132 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm31211-201ENSMUST00000199170 253 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm44053-201ENSMUST00000203364 929 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm34149-201ENSMUST00000203547 304 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 AC155266.1-201ENSMUST00000220762 904 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Nup88Q8CEC0 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm23294-201ENSMUST00000104150 164 ntBASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Mir466j-201ENSMUST00000116876 122 ntBASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm20453-201ENSMUST00000173968 226 ntBASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm38217-201ENSMUST00000194358 910 ntBASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm18413-201ENSMUST00000221573 655 ntBASIC6.8□□□□□ -1.32
Nup88Q8CEC0 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup88Q8CEC0 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Nup88Q8CEC0 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Nup88Q8CEC0 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.79□□□□□ -1.32
Nup88Q8CEC0 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.79□□□□□ -1.32
Nup88Q8CEC0 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
Nup88Q8CEC0 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Nup88Q8CEC0 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Nup88Q8CEC0 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.79□□□□□ -1.32
Nup88Q8CEC0 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms