Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm36968-201ENSMUST00000193737 315 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm37548-201ENSMUST00000194519 3814 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm38290-201ENSMUST00000195238 315 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm44274-201ENSMUST00000203417 256 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm43922-201ENSMUST00000205071 328 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm20734-201ENSMUST00000216939 193 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 AC153840.1-201ENSMUST00000219685 313 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 AC131720.2-201ENSMUST00000220420 431 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm35619-201ENSMUST00000222548 600 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 AC102575.1-201ENSMUST00000225348 547 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 CT009711.4-201ENSMUST00000225685 198 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 AC133203.2-201ENSMUST00000226709 464 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 CT030704.1-201ENSMUST00000227521 699 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm6786-201ENSMUST00000203165 1915 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm12016-201ENSMUST00000119079 681 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm11198-201ENSMUST00000119771 974 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm11533-201ENSMUST00000120287 477 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm11363-201ENSMUST00000121672 548 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm16259-201ENSMUST00000145241 553 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm25428-201ENSMUST00000157608 114 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm26321-201ENSMUST00000157740 242 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm27360-201ENSMUST00000183487 80 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm9541-201ENSMUST00000188409 502 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm37586-201ENSMUST00000193654 204 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm18952-201ENSMUST00000194471 846 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm8861-201ENSMUST00000196346 832 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm5288-201ENSMUST00000198323 1119 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm35558-202ENSMUST00000221819 499 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 AC131033.1-201ENSMUST00000228223 279 ntBASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim47Q8C0E3 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm25311-201ENSMUST00000104136 132 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm24519-201ENSMUST00000104507 132 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm12520-201ENSMUST00000117493 316 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm13627-201ENSMUST00000119700 706 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm5287-201ENSMUST00000120666 598 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm12140-201ENSMUST00000121214 544 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm14530-201ENSMUST00000122391 333 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm25969-201ENSMUST00000157166 132 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm26353-201ENSMUST00000158224 255 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms