Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Scaf4Q6PFF0 Gm4991-201ENSMUST00000118899 1552 ntBASIC6.42□□□□□ -1.38
Scaf4Q6PFF0 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Scaf4Q6PFF0 Gm37407-201ENSMUST00000194793 1316 ntBASIC6.42□□□□□ -1.38
Scaf4Q6PFF0 AC124746.1-201ENSMUST00000227535 1300 ntBASIC6.42□□□□□ -1.38
Scaf4Q6PFF0 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.42□□□□□ -1.38
Scaf4Q6PFF0 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Scaf4Q6PFF0 Gm38374-201ENSMUST00000194417 2033 ntBASIC6.42□□□□□ -1.38
Scaf4Q6PFF0 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm19176-201ENSMUST00000222149 1831 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm26419-201ENSMUST00000104272 133 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm13484-201ENSMUST00000120738 412 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm13131-201ENSMUST00000122228 321 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm7244-201ENSMUST00000164658 455 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm7502-201ENSMUST00000169235 733 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm20432-201ENSMUST00000173716 250 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Mir7685-201ENSMUST00000183555 62 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Mir6972-201ENSMUST00000184774 64 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm28655-201ENSMUST00000191538 692 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm7412-201ENSMUST00000191692 605 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm44135-201ENSMUST00000205221 368 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm9373-201ENSMUST00000208724 599 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm18789-201ENSMUST00000216115 550 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm6667-201ENSMUST00000217169 564 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm18503-201ENSMUST00000220340 728 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 AC167669.3-201ENSMUST00000224720 393 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm6195-201ENSMUST00000063059 357 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm6054-201ENSMUST00000078052 378 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm37140-201ENSMUST00000192914 1684 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.41□□□□□ -1.38
Scaf4Q6PFF0 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Scaf4Q6PFF0 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Scaf4Q6PFF0 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Scaf4Q6PFF0 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Scaf4Q6PFF0 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.4□□□□□ -1.38
Scaf4Q6PFF0 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Scaf4Q6PFF0 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Scaf4Q6PFF0 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Scaf4Q6PFF0 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.4□□□□□ -1.38
Scaf4Q6PFF0 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Scaf4Q6PFF0 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Scaf4Q6PFF0 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Scaf4Q6PFF0 Gm25757-201ENSMUST00000103986 123 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms