Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm42668-201ENSMUST00000200747 2487 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm37510-201ENSMUST00000194151 4762 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm37703-201ENSMUST00000192292 1784 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm22491-201ENSMUST00000157190 102 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm24080-201ENSMUST00000175178 232 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm28474-201ENSMUST00000188501 315 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm28788-201ENSMUST00000189717 375 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm29558-201ENSMUST00000190134 375 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm44972-201ENSMUST00000206419 406 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm44565-201ENSMUST00000208194 269 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 AC131997.2-201ENSMUST00000227452 362 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm9800-201ENSMUST00000052615 336 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm25079-201ENSMUST00000082529 203 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm22865-201ENSMUST00000083949 214 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 AC170999.1-201ENSMUST00000226359 1585 ntBASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim41Q5NCC3 AC129308.1-201ENSMUST00000223800 2309 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm45415-201ENSMUST00000209644 2074 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm13141-201ENSMUST00000117417 456 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm14865-201ENSMUST00000117523 494 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm11386-201ENSMUST00000117761 347 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 H3f3c-201ENSMUST00000119459 411 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm14383-201ENSMUST00000121637 386 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm25824-201ENSMUST00000157092 121 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm23756-201ENSMUST00000157582 114 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm6808-201ENSMUST00000162341 807 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm4152-201ENSMUST00000172675 259 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm22655-201ENSMUST00000174949 96 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm23003-201ENSMUST00000179948 107 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm27355-201ENSMUST00000185045 128 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm29284-201ENSMUST00000188363 255 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm29460-201ENSMUST00000188607 714 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm18430-201ENSMUST00000197534 682 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm3511-201ENSMUST00000199823 204 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm43973-201ENSMUST00000203562 210 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm44411-201ENSMUST00000204172 349 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm5023-201ENSMUST00000217442 587 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 AC151730.2-201ENSMUST00000224027 475 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 AC120375.2-202ENSMUST00000228722 397 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 AC154806.5-204ENSMUST00000228900 867 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm43534-201ENSMUST00000197685 2853 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm9030-201ENSMUST00000218405 2410 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Gm9029-201ENSMUST00000219232 2410 ntBASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim41Q5NCC3 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim41Q5NCC3 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim41Q5NCC3 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim41Q5NCC3 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
Trim41Q5NCC3 Gm42771-201ENSMUST00000198342 2486 ntBASIC12.27□□□□□ -0.45
Trim41Q5NCC3 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Trim41Q5NCC3 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms