Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm5582-201ENSMUST00000075251 522 ntBASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm6104-201ENSMUST00000078030 603 ntBASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.15□□□□□ -1.43
Upf3bQ3ULL6 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Upf3bQ3ULL6 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.15□□□□□ -1.43
Upf3bQ3ULL6 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Upf3bQ3ULL6 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Upf3bQ3ULL6 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Upf3bQ3ULL6 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Upf3bQ3ULL6 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Upf3bQ3ULL6 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Upf3bQ3ULL6 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Upf3bQ3ULL6 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Gm15400-201ENSMUST00000118944 601 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Gm22724-201ENSMUST00000158091 127 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Gm25227-201ENSMUST00000158204 112 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Gm24343-201ENSMUST00000158708 111 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Mir7072-201ENSMUST00000184542 60 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Gm42776-201ENSMUST00000198031 406 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Gm46223-201ENSMUST00000215196 675 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Mir143-201ENSMUST00000083511 63 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.14□□□□□ -1.43
Upf3bQ3ULL6 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Gm13866-201ENSMUST00000118901 968 ntBASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Gm11227-201ENSMUST00000119774 471 ntBASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Gm23631-201ENSMUST00000175291 123 ntBASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Gm31306-201ENSMUST00000197517 508 ntBASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Gm45008-201ENSMUST00000206420 493 ntBASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Gm45485-201ENSMUST00000211229 357 ntBASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Gm10221-201ENSMUST00000088299 309 ntBASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.13□□□□□ -1.43
Upf3bQ3ULL6 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Upf3bQ3ULL6 Gm16423-201ENSMUST00000120078 947 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms