Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.31□□□□□ -1.4
NcanP55066 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
NcanP55066 Gm12884-201ENSMUST00000120371 325 ntBASIC6.31□□□□□ -1.4
NcanP55066 Gm12293-201ENSMUST00000121898 590 ntBASIC6.31□□□□□ -1.4
NcanP55066 Gm22342-201ENSMUST00000122647 298 ntBASIC6.31□□□□□ -1.4
NcanP55066 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.31□□□□□ -1.4
NcanP55066 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Gm18215-201ENSMUST00000204429 798 ntBASIC6.31□□□□□ -1.4
NcanP55066 Gm44048-201ENSMUST00000204531 361 ntBASIC6.31□□□□□ -1.4
NcanP55066 Gm20586-201ENSMUST00000210122 547 ntBASIC6.31□□□□□ -1.4
NcanP55066 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.31□□□□□ -1.4
NcanP55066 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
NcanP55066 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.31□□□□□ -1.4
NcanP55066 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.31□□□□□ -1.4
NcanP55066 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
NcanP55066 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NcanP55066 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.31□□□□□ -1.4
NcanP55066 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.31□□□□□ -1.4
NcanP55066 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.31□□□□□ -1.4
NcanP55066 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
NcanP55066 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
NcanP55066 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
NcanP55066 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NcanP55066 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NcanP55066 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Gm6754-201ENSMUST00000117124 913 ntBASIC6.3□□□□□ -1.4
NcanP55066 Gm11908-201ENSMUST00000117755 347 ntBASIC6.3□□□□□ -1.4
NcanP55066 Gm13681-201ENSMUST00000117925 210 ntBASIC6.3□□□□□ -1.4
NcanP55066 H3f3c-201ENSMUST00000119459 411 ntBASIC6.3□□□□□ -1.4
NcanP55066 Gm22276-201ENSMUST00000122469 129 ntBASIC6.3□□□□□ -1.4
NcanP55066 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC6.3□□□□□ -1.4
NcanP55066 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC6.3□□□□□ -1.4
NcanP55066 Gm10319-202ENSMUST00000159439 846 ntBASIC6.3□□□□□ -1.4
NcanP55066 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Gm21139-201ENSMUST00000186594 877 ntBASIC6.3□□□□□ -1.4
NcanP55066 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.3□□□□□ -1.4
NcanP55066 Gm20786-201ENSMUST00000212649 436 ntBASIC6.3□□□□□ -1.4
NcanP55066 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.3□□□□□ -1.4
NcanP55066 Gm19936-201ENSMUST00000216414 838 ntBASIC6.3□□□□□ -1.4
NcanP55066 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.3□□□□□ -1.4
NcanP55066 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.3□□□□□ -1.4
NcanP55066 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.3□□□□□ -1.4
NcanP55066 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.3□□□□□ -1.4
NcanP55066 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.3□□□□□ -1.4
NcanP55066 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.3□□□□□ -1.4
NcanP55066 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.3□□□□□ -1.4
NcanP55066 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.3□□□□□ -1.4
NcanP55066 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.3□□□□□ -1.4
NcanP55066 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NcanP55066 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
NcanP55066 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NcanP55066 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.29□□□□□ -1.4
NcanP55066 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
NcanP55066 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.29□□□□□ -1.4
NcanP55066 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.29□□□□□ -1.4
NcanP55066 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
NcanP55066 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NcanP55066 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.29□□□□□ -1.4
NcanP55066 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
NcanP55066 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.29□□□□□ -1.4
NcanP55066 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
NcanP55066 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.29□□□□□ -1.4
NcanP55066 Mir7087-201ENSMUST00000184840 70 ntBASIC6.29□□□□□ -1.4
NcanP55066 Gm43744-201ENSMUST00000196387 688 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms