Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC6.75□□□□□ -1.33
Col1a1P11087 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col1a1P11087 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col1a1P11087 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col1a1P11087 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col1a1P11087 Gm37215-201ENSMUST00000194927 1259 ntBASIC6.75□□□□□ -1.33
Col1a1P11087 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col1a1P11087 Clec2j-202ENSMUST00000203658 606 ntBASIC6.75□□□□□ -1.33
Col1a1P11087 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.75□□□□□ -1.33
Col1a1P11087 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC6.75□□□□□ -1.33
Col1a1P11087 Gm40598-201ENSMUST00000222953 547 ntBASIC6.75□□□□□ -1.33
Col1a1P11087 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col1a1P11087 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col1a1P11087 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col1a1P11087 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col1a1P11087 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col1a1P11087 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col1a1P11087 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.75□□□□□ -1.33
Col1a1P11087 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.75□□□□□ -1.33
Col1a1P11087 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.75□□□□□ -1.33
Col1a1P11087 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col1a1P11087 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.75□□□□□ -1.33
Col1a1P11087 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.74□□□□□ -1.33
Col1a1P11087 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col1a1P11087 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.74□□□□□ -1.33
Col1a1P11087 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Col1a1P11087 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.74□□□□□ -1.33
Col1a1P11087 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col1a1P11087 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col1a1P11087 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col1a1P11087 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.74□□□□□ -1.33
Col1a1P11087 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col1a1P11087 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col1a1P11087 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col1a1P11087 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.74□□□□□ -1.33
Col1a1P11087 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Col1a1P11087 Gm26069-201ENSMUST00000157497 277 ntBASIC6.74□□□□□ -1.33
Col1a1P11087 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.74□□□□□ -1.33
Col1a1P11087 Gm18618-201ENSMUST00000222211 473 ntBASIC6.74□□□□□ -1.33
Col1a1P11087 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col1a1P11087 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col1a1P11087 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col1a1P11087 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.74□□□□□ -1.33
Col1a1P11087 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col1a1P11087 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col1a1P11087 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col1a1P11087 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col1a1P11087 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col1a1P11087 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.74□□□□□ -1.33
Col1a1P11087 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col1a1P11087 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC6.74□□□□□ -1.33
Col1a1P11087 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col1a1P11087 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6.74□□□□□ -1.33
Col1a1P11087 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col1a1P11087 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.74□□□□□ -1.33
Col1a1P11087 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.74□□□□□ -1.33
Col1a1P11087 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Col1a1P11087 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col1a1P11087 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col1a1P11087 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.74□□□□□ -1.33
Col1a1P11087 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col1a1P11087 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col1a1P11087 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.74□□□□□ -1.33
Col1a1P11087 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Col1a1P11087 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Gm38697-201ENSMUST00000198061 1746 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.73□□□□□ -1.33
Col1a1P11087 Gm14515-201ENSMUST00000121327 216 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Gm11909-201ENSMUST00000121424 759 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Gm6067-201ENSMUST00000121648 491 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.73□□□□□ -1.33
Col1a1P11087 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Gm20674-201ENSMUST00000177452 369 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Gm44243-201ENSMUST00000204323 692 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Gm5373-201ENSMUST00000212113 1050 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col1a1P11087 AC238676.3-201ENSMUST00000223042 154 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col1a1P11087 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col1a1P11087 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.73□□□□□ -1.33
Col1a1P11087 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col1a1P11087 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col1a1P11087 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col1a1P11087 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Col1a1P11087 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms