Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm22636-201ENSMUST00000158142 275 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm25246-201ENSMUST00000175476 69 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm6472-201ENSMUST00000178147 651 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm45596-201ENSMUST00000209279 434 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm38574-201ENSMUST00000211855 640 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Mir375-201ENSMUST00000083682 64 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Gm14938-201ENSMUST00000119482 943 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Gm25227-201ENSMUST00000158204 112 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Gm42646-201ENSMUST00000202233 914 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Gm43929-201ENSMUST00000203025 409 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Gm45008-201ENSMUST00000206420 493 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Gm19116-201ENSMUST00000218592 642 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Rpa3Q9CQ71 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm11821-201ENSMUST00000117335 979 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm22690-201ENSMUST00000175054 110 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm4832-201ENSMUST00000182679 399 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm27460-201ENSMUST00000184213 100 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm44360-201ENSMUST00000200081 82 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 Gm31166-201ENSMUST00000209326 288 ntBASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC6.04□□□□□ -1.44
Rpa3Q9CQ71 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms