Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 AC124516.2-201ENSMUST00000221455 1829 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm45415-201ENSMUST00000209644 2074 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm23653-201ENSMUST00000116751 97 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm25178-201ENSMUST00000122633 325 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm16102-201ENSMUST00000160955 420 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm38334-201ENSMUST00000195060 313 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm42924-201ENSMUST00000197261 185 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm5660-201ENSMUST00000197453 1149 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm43212-201ENSMUST00000198208 394 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm2221-201ENSMUST00000209342 418 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 AC131997.2-201ENSMUST00000227452 362 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm5185-201ENSMUST00000080271 619 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Mir181a-1-201ENSMUST00000083631 87 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm23345-201ENSMUST00000083817 150 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm22865-201ENSMUST00000083949 214 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Gm4991-201ENSMUST00000118899 1552 ntBASIC7.84□□□□□ -1.15
Trim47Q8C0E3 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Trim47Q8C0E3 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Trim47Q8C0E3 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.84□□□□□ -1.16
Trim47Q8C0E3 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm14802-201ENSMUST00000121944 1885 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm6820-201ENSMUST00000188803 2173 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm15988-201ENSMUST00000118677 367 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm15111-201ENSMUST00000122142 878 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Mir1929-201ENSMUST00000158635 93 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm23024-201ENSMUST00000158770 292 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm22533-201ENSMUST00000158821 274 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm17212-201ENSMUST00000166666 259 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm3111-201ENSMUST00000167426 490 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm8256-201ENSMUST00000169178 453 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm18191-201ENSMUST00000174624 824 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm28560-201ENSMUST00000186091 315 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm28334-201ENSMUST00000186653 315 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm28495-201ENSMUST00000188452 315 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm28232-201ENSMUST00000188683 315 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm28481-201ENSMUST00000189231 315 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm28413-201ENSMUST00000189369 291 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm29059-201ENSMUST00000191534 315 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm37765-201ENSMUST00000192395 315 ntBASIC7.83□□□□□ -1.16
Trim47Q8C0E3 Gm37237-201ENSMUST00000192893 315 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 180.7 ms