Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm3822-201ENSMUST00000201941 2935 ntBASIC8.83□□□□□ -1
Trim35Q8C006 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC8.83□□□□□ -1
Trim35Q8C006 Tex11-203ENSMUST00000113718 3278 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Trim35Q8C006 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Ttc39c-204ENSMUST00000169401 1950 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
Trim35Q8C006 Selenop-203ENSMUST00000159216 2085 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trim35Q8C006 9330158H04Rik-208ENSMUST00000161820 2324 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trim35Q8C006 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Rpap3-ps2-201ENSMUST00000184741 2161 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 AC165260.6-204ENSMUST00000225571 3508 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trim35Q8C006 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Mcf2l-204ENSMUST00000110867 3864 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Zc3h3-201ENSMUST00000100538 3360 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Gm16316-201ENSMUST00000154065 3393 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Olfr412-202ENSMUST00000216362 1786 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trim35Q8C006 Ccdc36-201ENSMUST00000076592 2890 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Sdr42e1-202ENSMUST00000173522 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Fbxl2-201ENSMUST00000035090 3464 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Mir705-201ENSMUST00000102058 82 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Gm23659-201ENSMUST00000102245 110 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Gm10923-201ENSMUST00000105085 418 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Ccl25-204ENSMUST00000110982 823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Gm12210-201ENSMUST00000118245 153 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Gm13542-201ENSMUST00000118484 637 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Gm14754-201ENSMUST00000119762 726 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Gm5883-201ENSMUST00000120735 495 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Gm16077-201ENSMUST00000121915 655 ntBASIC8.82□□□□□ -1
Trim35Q8C006 2210408F21Rik-205ENSMUST00000138606 482 ntTSL 5 BASIC8.82□□□□□ -1
Trim35Q8C006 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC8.82□□□□□ -1
Trim35Q8C006 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trim35Q8C006 Prdx5-204ENSMUST00000173091 501 ntTSL 5 BASIC8.82□□□□□ -1
Trim35Q8C006 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Gm7083-201ENSMUST00000178617 450 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Gm18828-202ENSMUST00000181035 310 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Gm39094-202ENSMUST00000206679 624 ntTSL 5 BASIC8.82□□□□□ -1
Trim35Q8C006 Gm45105-201ENSMUST00000207824 397 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Gm18562-201ENSMUST00000209949 915 ntBASIC8.82□□□□□ -1
Trim35Q8C006 AC133947.1-201ENSMUST00000213336 614 ntTSL 3 BASIC8.82□□□□□ -1
Trim35Q8C006 Gm31698-201ENSMUST00000214227 430 ntTSL 2 BASIC8.82□□□□□ -1
Trim35Q8C006 AC134607.1-201ENSMUST00000214707 485 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trim35Q8C006 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC8.82□□□□□ -1
Trim35Q8C006 Gm8768-201ENSMUST00000220020 826 ntBASIC8.82□□□□□ -1
Trim35Q8C006 AC154840.1-201ENSMUST00000225216 408 ntBASIC8.82□□□□□ -1
Trim35Q8C006 AC123656.1-201ENSMUST00000227121 581 ntBASIC8.82□□□□□ -1
Trim35Q8C006 AC139130.1-201ENSMUST00000228281 620 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Gm10272-201ENSMUST00000092371 350 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trim35Q8C006 Gm6505-201ENSMUST00000094335 648 ntBASIC8.82□□□□□ -1
Trim35Q8C006 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trim35Q8C006 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Cavin2-201ENSMUST00000051572 3055 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Ttc21b-201ENSMUST00000102718 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Trim35Q8C006 Slc30a6-202ENSMUST00000179074 2171 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Slc30a6-201ENSMUST00000024870 2156 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim35Q8C006 Pus3-201ENSMUST00000034615 2019 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Sun1-206ENSMUST00000110884 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim35Q8C006 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim35Q8C006 Gm43657-201ENSMUST00000200336 3833 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC8.81□□□□□ -1
Trim35Q8C006 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trim35Q8C006 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 L3mbtl3-203ENSMUST00000174766 3411 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Ston1-207ENSMUST00000163588 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Gm40603-202ENSMUST00000219975 1642 ntTSL 5 BASIC8.81□□□□□ -1
Trim35Q8C006 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Gm37818-201ENSMUST00000194952 3169 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Igkv14-130-201ENSMUST00000103307 350 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Trim35Q8C006 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Trim35Q8C006 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Gm8430-201ENSMUST00000119780 471 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Mup-ps20-201ENSMUST00000121132 389 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Gm8317-201ENSMUST00000121261 471 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Gm12413-201ENSMUST00000121508 312 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Gm15580-201ENSMUST00000121587 556 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Gm11378-201ENSMUST00000130966 229 ntTSL 3 BASIC8.81□□□□□ -1
Trim35Q8C006 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms