Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm37925-201ENSMUST00000195352 4255 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm3943-201ENSMUST00000118606 718 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 Defa-ps11-201ENSMUST00000119719 299 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 n-R5s48-201ENSMUST00000122482 110 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm4832-201ENSMUST00000182679 399 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm18969-201ENSMUST00000189423 730 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm19231-201ENSMUST00000193212 830 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm43842-201ENSMUST00000202890 2982 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm4874-201ENSMUST00000203589 691 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm44539-201ENSMUST00000206010 238 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm5418-201ENSMUST00000206932 528 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm3257-201ENSMUST00000207217 675 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 AC112956.1-201ENSMUST00000213563 492 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm46192-201ENSMUST00000217894 326 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm43162-201ENSMUST00000198292 1770 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp47Q8BY87 AC122357.3-201ENSMUST00000221260 2293 ntBASIC8.07□□□□□ -1.12
Usp47Q8BY87 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Usp47Q8BY87 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp47Q8BY87 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC8.06□□□□□ -1.12
Usp47Q8BY87 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Usp47Q8BY87 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Usp47Q8BY87 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Usp47Q8BY87 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Usp47Q8BY87 Gm37342-201ENSMUST00000194588 4965 ntBASIC8.06□□□□□ -1.12
Usp47Q8BY87 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Usp47Q8BY87 Gm5381-201ENSMUST00000117975 1250 ntBASIC8.06□□□□□ -1.12
Usp47Q8BY87 Gm12303-201ENSMUST00000119506 673 ntBASIC8.06□□□□□ -1.12
Usp47Q8BY87 Gm14521-201ENSMUST00000119545 350 ntBASIC8.06□□□□□ -1.12
Usp47Q8BY87 Gm5405-201ENSMUST00000120478 609 ntBASIC8.06□□□□□ -1.12
Usp47Q8BY87 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC8.06□□□□□ -1.12
Usp47Q8BY87 Gm22106-201ENSMUST00000122544 127 ntBASIC8.06□□□□□ -1.12
Usp47Q8BY87 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp47Q8BY87 Gm2429-201ENSMUST00000194635 586 ntBASIC8.06□□□□□ -1.12
Usp47Q8BY87 Gm38384-201ENSMUST00000195413 1122 ntBASIC8.06□□□□□ -1.12
Usp47Q8BY87 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC8.06□□□□□ -1.12
Usp47Q8BY87 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp47Q8BY87 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Usp47Q8BY87 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC8.06□□□□□ -1.12
Usp47Q8BY87 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp47Q8BY87 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp47Q8BY87 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp47Q8BY87 AC124516.1-201ENSMUST00000221845 3544 ntBASIC8.06□□□□□ -1.12
Usp47Q8BY87 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp47Q8BY87 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC8.06□□□□□ -1.12
Usp47Q8BY87 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp47Q8BY87 CT009480.3-201ENSMUST00000224051 3032 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm42540-201ENSMUST00000200319 2008 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm14857-201ENSMUST00000117862 3185 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm38198-201ENSMUST00000191772 3581 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm45838-201ENSMUST00000207355 2447 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm15741-201ENSMUST00000119401 754 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Atf1-ps-201ENSMUST00000120608 810 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm14620-201ENSMUST00000120656 383 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Mir3090-201ENSMUST00000175597 87 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm28943-201ENSMUST00000186187 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm28736-201ENSMUST00000186257 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm2325-201ENSMUST00000186637 581 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm29401-201ENSMUST00000186690 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm29178-204ENSMUST00000186784 615 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms