Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm23238-201ENSMUST00000083007 164 ntBASIC6.96□□□□□ -1.3
Ddx55Q6ZPL9 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx55Q6ZPL9 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Ddx55Q6ZPL9 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx55Q6ZPL9 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.96□□□□□ -1.3
Ddx55Q6ZPL9 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx55Q6ZPL9 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx55Q6ZPL9 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx55Q6ZPL9 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.96□□□□□ -1.3
Ddx55Q6ZPL9 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ddx55Q6ZPL9 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx55Q6ZPL9 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.96□□□□□ -1.3
Ddx55Q6ZPL9 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm14158-201ENSMUST00000118409 308 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm11866-201ENSMUST00000120209 335 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm14957-201ENSMUST00000121069 817 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm26106-201ENSMUST00000157254 228 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm27762-201ENSMUST00000183417 109 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Mir7669-201ENSMUST00000183442 58 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm43744-201ENSMUST00000196387 688 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm44494-201ENSMUST00000196760 129 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm43724-201ENSMUST00000197516 226 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm43148-201ENSMUST00000198237 520 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm5318-201ENSMUST00000205249 406 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm45343-201ENSMUST00000210452 828 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm18705-201ENSMUST00000215985 913 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 AC122858.3-201ENSMUST00000226341 740 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.95□□□□□ -1.3
Ddx55Q6ZPL9 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Gm42671-201ENSMUST00000198013 1604 ntBASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Gm13493-201ENSMUST00000120318 493 ntBASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Gm14212-201ENSMUST00000122023 826 ntBASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Mir6374-201ENSMUST00000184003 107 ntBASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Gm28614-201ENSMUST00000186483 458 ntBASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Gm42593-201ENSMUST00000198469 377 ntBASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Gm8703-201ENSMUST00000203793 730 ntBASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx55Q6ZPL9 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms