Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gm18259-201ENSMUST00000220991 2010 ntBASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Gm11987-201ENSMUST00000118524 381 ntBASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Gm22411-201ENSMUST00000175462 126 ntBASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Gm22002-201ENSMUST00000175622 125 ntBASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Gm19880-201ENSMUST00000207731 318 ntBASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Nup98Q6PFD9 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Nup98Q6PFD9 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.71□□□□□ -1.33
Nup98Q6PFD9 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Gm10652-201ENSMUST00000199790 2622 ntBASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Gm22916-201ENSMUST00000157616 119 ntBASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Gm15812-201ENSMUST00000162331 748 ntBASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Gm8604-201ENSMUST00000183150 965 ntBASIC6.71□□□□□ -1.34
Nup98Q6PFD9 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.71□□□□□ -1.34
Nup98Q6PFD9 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Nup98Q6PFD9 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm6382-201ENSMUST00000118873 942 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm5139-201ENSMUST00000175943 249 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm29596-201ENSMUST00000185710 385 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm17952-201ENSMUST00000193914 747 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm17775-201ENSMUST00000198542 258 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm18468-201ENSMUST00000207321 369 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm18470-201ENSMUST00000207467 420 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm18465-201ENSMUST00000207468 369 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm18464-201ENSMUST00000207803 420 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm18458-201ENSMUST00000207908 369 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm18461-201ENSMUST00000208421 420 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Gm37151-201ENSMUST00000194631 5007 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nup98Q6PFD9 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm4989-201ENSMUST00000118711 749 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm23546-201ENSMUST00000158211 137 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm3170-201ENSMUST00000168753 850 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms