Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sp140Q6NSQ5 Glycam1-204ENSMUST00000228895 641 ntBASIC6.18□□□□□ -1.42
Sp140Q6NSQ5 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sp140Q6NSQ5 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sp140Q6NSQ5 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sp140Q6NSQ5 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Sp140Q6NSQ5 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Sp140Q6NSQ5 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sp140Q6NSQ5 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Sp140Q6NSQ5 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
Sp140Q6NSQ5 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.18□□□□□ -1.42
Sp140Q6NSQ5 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.18□□□□□ -1.42
Sp140Q6NSQ5 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sp140Q6NSQ5 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Mir669p-2-201ENSMUST00000103868 87 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Mir669p-1-201ENSMUST00000103884 87 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm24069-201ENSMUST00000104512 127 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm12584-201ENSMUST00000117109 1105 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm11462-201ENSMUST00000117749 562 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm11877-201ENSMUST00000118921 852 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm14331-201ENSMUST00000120396 409 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm22817-201ENSMUST00000157448 356 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm29513-201ENSMUST00000185741 202 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm9127-201ENSMUST00000188041 985 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm20915-201ENSMUST00000191575 663 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm37908-201ENSMUST00000195828 470 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm7413-201ENSMUST00000219498 462 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm40598-201ENSMUST00000222953 547 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 AC147639.1-201ENSMUST00000224216 661 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Diaph3-206ENSMUST00000226745 713 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.17□□□□□ -1.42
Sp140Q6NSQ5 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Gm12939-201ENSMUST00000117303 165 ntBASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Gm11278-201ENSMUST00000121002 997 ntBASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Gm22818-201ENSMUST00000157446 104 ntBASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Gm20637-201ENSMUST00000175715 462 ntBASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sp140Q6NSQ5 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms