Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Foxc1Q61572 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Foxc1Q61572 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Foxc1Q61572 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Foxc1Q61572 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Foxc1Q61572 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Foxc1Q61572 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC5.87□□□□□ -1.47
Foxc1Q61572 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Foxc1Q61572 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Foxc1Q61572 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Foxc1Q61572 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Foxc1Q61572 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Foxc1Q61572 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
Foxc1Q61572 AC134596.1-201ENSMUST00000222016 1922 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm16487-201ENSMUST00000105048 4037 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Mir466b-8-201ENSMUST00000103883 86 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm9429-201ENSMUST00000117804 868 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm11346-201ENSMUST00000118346 704 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm15364-201ENSMUST00000119618 585 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm15028-201ENSMUST00000120295 370 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm2986-201ENSMUST00000121603 382 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm26184-201ENSMUST00000157686 131 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm15900-201ENSMUST00000161584 342 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm22911-201ENSMUST00000177920 107 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm27617-201ENSMUST00000184321 168 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm27694-201ENSMUST00000184740 86 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm29739-201ENSMUST00000191760 529 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm37185-201ENSMUST00000193852 410 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm40040-201ENSMUST00000196123 504 ntTSL 3 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm42525-201ENSMUST00000196257 527 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Mir466e-201ENSMUST00000198862 84 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Mir466c-1-201ENSMUST00000200654 84 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm44853-201ENSMUST00000209070 250 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC5.86□□□□□ -1.47
Foxc1Q61572 AC132304.1-201ENSMUST00000218860 135 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.86□□□□□ -1.47
Foxc1Q61572 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Foxc1Q61572 AC161758.1-201ENSMUST00000226123 310 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 AC154598.1-201ENSMUST00000227079 347 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 AC126690.1-201ENSMUST00000228898 397 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm42653-201ENSMUST00000200644 2839 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gbp9-202ENSMUST00000100961 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm45292-201ENSMUST00000211232 2207 ntBASIC5.86□□□□□ -1.47
Foxc1Q61572 Rbm43-202ENSMUST00000102768 2106 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC5.86□□□□□ -1.47
Foxc1Q61572 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Foxc1Q61572 4933402E13Rik-201ENSMUST00000051414 1970 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Foxc1Q61572 Heatr9-201ENSMUST00000019069 1875 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Foxc1Q61572 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Foxc1Q61572 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Foxc1Q61572 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms