Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox9Q04887 Gm44088-201ENSMUST00000204595 237 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.68□□□□□ -1.34
Sox9Q04887 Gm20948-201ENSMUST00000211091 449 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC6.68□□□□□ -1.34
Sox9Q04887 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC6.68□□□□□ -1.34
Sox9Q04887 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.68□□□□□ -1.34
Sox9Q04887 Gm36262-201ENSMUST00000223274 499 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 AC108945.1-201ENSMUST00000226477 94 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 AC102815.1-201ENSMUST00000226662 1061 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 AC132317.2-201ENSMUST00000227301 519 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox9Q04887 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox9Q04887 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Sox9Q04887 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox9Q04887 Gm16335-201ENSMUST00000077495 309 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 Gm23330-201ENSMUST00000082660 164 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 Gm25005-201ENSMUST00000083812 156 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox9Q04887 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox9Q04887 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Sox9Q04887 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox9Q04887 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
Sox9Q04887 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox9Q04887 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Sox9Q04887 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Sox9Q04887 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox9Q04887 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Sox9Q04887 Gm42736-201ENSMUST00000200723 1353 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox9Q04887 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Sox9Q04887 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.68□□□□□ -1.34
Sox9Q04887 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox9Q04887 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox9Q04887 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Sox9Q04887 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox9Q04887 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Sox9Q04887 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm14463-201ENSMUST00000121117 498 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm16363-201ENSMUST00000132460 877 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.67□□□□□ -1.34
Sox9Q04887 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
Sox9Q04887 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox9Q04887 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox9Q04887 Gm25013-201ENSMUST00000158402 128 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.67□□□□□ -1.34
Sox9Q04887 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC6.67□□□□□ -1.34
Sox9Q04887 Gm19807-201ENSMUST00000173971 667 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Sox9Q04887 Gm24754-201ENSMUST00000177997 107 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Sox9Q04887 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox9Q04887 Gm29197-201ENSMUST00000185922 702 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.67□□□□□ -1.34
Sox9Q04887 Gm37700-201ENSMUST00000192617 965 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm8860-201ENSMUST00000193160 445 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm9931-201ENSMUST00000193584 1185 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm29745-201ENSMUST00000198005 687 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox9Q04887 Gm42625-201ENSMUST00000198611 922 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm44234-201ENSMUST00000204246 900 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm44982-201ENSMUST00000208795 471 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm33601-201ENSMUST00000210001 961 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Gm6477-201ENSMUST00000217098 764 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 AC153526.1-201ENSMUST00000219750 190 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Olfr192-201ENSMUST00000080251 925 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
Sox9Q04887 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.67□□□□□ -1.34
Sox9Q04887 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox9Q04887 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms