Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.41□□□□□ -1.38
Msx2Q03358 Gm6362-201ENSMUST00000217686 836 ntBASIC6.41□□□□□ -1.38
Msx2Q03358 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.41□□□□□ -1.38
Msx2Q03358 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm10126-201ENSMUST00000221732 168 ntBASIC6.41□□□□□ -1.38
Msx2Q03358 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.41□□□□□ -1.38
Msx2Q03358 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 AC154747.4-201ENSMUST00000224802 903 ntBASIC6.41□□□□□ -1.38
Msx2Q03358 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Msx2Q03358 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Msx2Q03358 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm10115-201ENSMUST00000076071 1228 ntBASIC6.41□□□□□ -1.38
Msx2Q03358 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.41□□□□□ -1.38
Msx2Q03358 Gm14404-201ENSMUST00000119117 1660 ntBASIC6.41□□□□□ -1.38
Msx2Q03358 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.41□□□□□ -1.38
Msx2Q03358 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Msx2Q03358 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.41□□□□□ -1.38
Msx2Q03358 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Msx2Q03358 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Msx2Q03358 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Msx2Q03358 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Msx2Q03358 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Msx2Q03358 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Msx2Q03358 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Msx2Q03358 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Msx2Q03358 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
Msx2Q03358 Gm42701-201ENSMUST00000196117 1657 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Msx2Q03358 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Msx2Q03358 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Msx2Q03358 Gm13798-201ENSMUST00000118285 139 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Gm12307-201ENSMUST00000120581 590 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Msx2Q03358 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.4□□□□□ -1.38
Msx2Q03358 Gm22080-201ENSMUST00000157591 106 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Gm26468-201ENSMUST00000158644 106 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.38
Msx2Q03358 Gm15790-201ENSMUST00000161109 1251 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Gm11107-201ENSMUST00000165414 505 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC6.4□□□□□ -1.38
Msx2Q03358 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Gm26381-201ENSMUST00000174895 92 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Mir5101-201ENSMUST00000175181 83 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Mir8094-201ENSMUST00000183361 117 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.4□□□□□ -1.38
Msx2Q03358 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Msx2Q03358 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Msx2Q03358 Gm43436-201ENSMUST00000199308 147 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Msx2Q03358 Gm44931-201ENSMUST00000206056 545 ntBASIC6.4□□□□□ -1.38
Msx2Q03358 Gm45196-201ENSMUST00000206751 825 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms