Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.54□□□□□ -1.36
Col2a1P28481 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col2a1P28481 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col2a1P28481 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col2a1P28481 Gm24265-201ENSMUST00000101833 141 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC6.53□□□□□ -1.36
Col2a1P28481 Gm11270-201ENSMUST00000117685 471 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm16007-201ENSMUST00000117837 286 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm11826-201ENSMUST00000118781 438 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm6081-201ENSMUST00000134472 489 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm11197-201ENSMUST00000145158 839 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.53□□□□□ -1.36
Col2a1P28481 Gm22122-201ENSMUST00000175147 200 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm24407-201ENSMUST00000177864 141 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm4845-201ENSMUST00000179202 562 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC6.53□□□□□ -1.36
Col2a1P28481 Gm43794-201ENSMUST00000200971 692 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm35648-201ENSMUST00000202304 475 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm4587-201ENSMUST00000209135 637 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col2a1P28481 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col2a1P28481 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.53□□□□□ -1.36
Col2a1P28481 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.53□□□□□ -1.36
Col2a1P28481 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.53□□□□□ -1.36
Col2a1P28481 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col2a1P28481 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Col2a1P28481 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col2a1P28481 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.53□□□□□ -1.36
Col2a1P28481 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.53□□□□□ -1.36
Col2a1P28481 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Col2a1P28481 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col2a1P28481 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col2a1P28481 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Col2a1P28481 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col2a1P28481 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col2a1P28481 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col2a1P28481 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col2a1P28481 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col2a1P28481 Gm37304-201ENSMUST00000193833 2886 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col2a1P28481 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm6175-201ENSMUST00000121351 400 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm11804-201ENSMUST00000121663 468 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC6.53□□□□□ -1.36
Col2a1P28481 Gm25603-201ENSMUST00000158361 105 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm23806-201ENSMUST00000175157 109 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm23631-201ENSMUST00000175291 123 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm3307-201ENSMUST00000176164 632 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col2a1P28481 Gm18117-201ENSMUST00000187720 742 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm44108-201ENSMUST00000203525 422 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC6.53□□□□□ -1.36
Col2a1P28481 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.53□□□□□ -1.36
Col2a1P28481 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col2a1P28481 Gm23686-201ENSMUST00000083241 164 ntBASIC6.53□□□□□ -1.36
Col2a1P28481 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col2a1P28481 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Col2a1P28481 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.52□□□□□ -1.36
Col2a1P28481 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Col2a1P28481 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
Col2a1P28481 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col2a1P28481 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Col2a1P28481 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col2a1P28481 Gm9923-201ENSMUST00000217785 1836 ntBASIC6.52□□□□□ -1.37
Col2a1P28481 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.52□□□□□ -1.37
Col2a1P28481 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col2a1P28481 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col2a1P28481 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
Col2a1P28481 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col2a1P28481 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col2a1P28481 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col2a1P28481 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.52□□□□□ -1.37
Col2a1P28481 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col2a1P28481 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Col2a1P28481 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col2a1P28481 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.52□□□□□ -1.37
Col2a1P28481 Gm16200-201ENSMUST00000120385 331 ntBASIC6.52□□□□□ -1.37
Col2a1P28481 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC6.52□□□□□ -1.37
Col2a1P28481 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.52□□□□□ -1.37
Col2a1P28481 Gm22895-201ENSMUST00000157508 308 ntBASIC6.52□□□□□ -1.37
Col2a1P28481 Gm18728-201ENSMUST00000186155 753 ntBASIC6.52□□□□□ -1.37
Col2a1P28481 Gm38040-201ENSMUST00000193505 225 ntBASIC6.52□□□□□ -1.37
Col2a1P28481 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC6.52□□□□□ -1.37
Col2a1P28481 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.52□□□□□ -1.37
Col2a1P28481 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.52□□□□□ -1.37
Col2a1P28481 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.52□□□□□ -1.37
Col2a1P28481 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col2a1P28481 Gm18541-201ENSMUST00000215935 538 ntBASIC6.52□□□□□ -1.37
Col2a1P28481 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC6.52□□□□□ -1.37
Col2a1P28481 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
Col2a1P28481 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col2a1P28481 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col2a1P28481 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col2a1P28481 Mir27a-201ENSMUST00000083510 87 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms