Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm6261-201ENSMUST00000204707 760 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm44961-201ENSMUST00000207450 196 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm18205-201ENSMUST00000209215 841 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm18851-201ENSMUST00000210087 1058 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm6667-201ENSMUST00000217169 564 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm18503-201ENSMUST00000220340 728 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 AC156560.1-201ENSMUST00000221425 256 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm10126-201ENSMUST00000221732 168 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 AC154573.2-201ENSMUST00000224174 378 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 AC140451.1-201ENSMUST00000227984 737 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm25587-201ENSMUST00000082498 166 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm43059-201ENSMUST00000202437 1388 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 AU020206-202ENSMUST00000206358 3009 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm26417-201ENSMUST00000104274 135 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm26016-201ENSMUST00000104403 129 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm24473-201ENSMUST00000104483 131 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm22710-201ENSMUST00000116892 125 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm15094-201ENSMUST00000118394 1131 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm12447-201ENSMUST00000119110 470 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm12103-201ENSMUST00000121892 362 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm8032-201ENSMUST00000171009 574 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm5300-201ENSMUST00000182201 1003 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm27970-201ENSMUST00000184854 407 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm29650-201ENSMUST00000188485 742 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm29460-201ENSMUST00000188607 714 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm38146-201ENSMUST00000194121 1293 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm19185-201ENSMUST00000196365 643 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm17935-201ENSMUST00000196649 772 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm42938-201ENSMUST00000198414 1072 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Igkv13-82-201ENSMUST00000200308 346 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 122 ms