Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim39Q9ESN2 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim39Q9ESN2 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim39Q9ESN2 Gm38699-201ENSMUST00000221301 1740 ntBASIC6.75□□□□□ -1.33
Trim39Q9ESN2 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.75□□□□□ -1.33
Trim39Q9ESN2 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim39Q9ESN2 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim39Q9ESN2 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim39Q9ESN2 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim39Q9ESN2 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim39Q9ESN2 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.75□□□□□ -1.33
Trim39Q9ESN2 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Mir669e-201ENSMUST00000117003 119 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm12193-201ENSMUST00000117250 379 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm14677-201ENSMUST00000117866 486 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm13521-201ENSMUST00000118922 866 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm11943-201ENSMUST00000119473 327 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm12727-201ENSMUST00000119885 359 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm11259-201ENSMUST00000120554 715 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm22687-201ENSMUST00000158301 105 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm19840-201ENSMUST00000169624 882 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm8392-201ENSMUST00000185647 835 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm4545-201ENSMUST00000190797 603 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm37392-201ENSMUST00000192098 516 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm38019-201ENSMUST00000195133 380 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm9632-201ENSMUST00000195934 643 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm43542-201ENSMUST00000199505 379 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 AC161520.1-201ENSMUST00000210954 939 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm4972-201ENSMUST00000211108 1254 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 CR974485.1-201ENSMUST00000222408 402 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 CT009713.9-201ENSMUST00000223604 389 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 AC151907.1-201ENSMUST00000228812 412 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm5815-201ENSMUST00000050706 1185 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm24490-201ENSMUST00000083803 98 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm42595-201ENSMUST00000196771 1607 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim39Q9ESN2 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm43515-201ENSMUST00000197930 2141 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms