Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm11848-201ENSMUST00000121207 973 ntBASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm8761-201ENSMUST00000121507 955 ntBASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm23631-201ENSMUST00000175291 123 ntBASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm2539-203ENSMUST00000181352 746 ntBASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm19900-201ENSMUST00000207285 576 ntBASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.08□□□□□ -1.44
Rpa3Q9CQ71 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm11227-201ENSMUST00000119774 471 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm23408-201ENSMUST00000158523 265 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm24303-201ENSMUST00000178237 126 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm2058-201ENSMUST00000178791 560 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm27006-201ENSMUST00000182218 943 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm31306-201ENSMUST00000197517 508 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm29745-201ENSMUST00000198005 687 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm2040-201ENSMUST00000202979 289 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm44432-201ENSMUST00000203342 938 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm44108-201ENSMUST00000203525 422 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm7890-201ENSMUST00000204877 601 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Rpa3Q9CQ71 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm10936-201ENSMUST00000105264 252 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm15400-201ENSMUST00000118944 601 ntBASIC6.06□□□□□ -1.44
Rpa3Q9CQ71 Gm8545-201ENSMUST00000120692 801 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms