Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm27348-201ENSMUST00000184511 170 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm21803-201ENSMUST00000188897 693 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm28567-201ENSMUST00000190270 693 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm37044-201ENSMUST00000193531 693 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm38369-201ENSMUST00000195101 693 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm44382-201ENSMUST00000198683 122 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm43233-201ENSMUST00000200491 616 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm19182-201ENSMUST00000207139 577 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm7570-201ENSMUST00000215246 698 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm23686-201ENSMUST00000083241 164 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm43426-201ENSMUST00000197287 2597 ntBASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.55□□□□□ -1.36
Ccdc38Q8CDN8 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Gm25795-201ENSMUST00000104421 132 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Gm16007-201ENSMUST00000117837 286 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Gm13641-201ENSMUST00000117993 473 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Gm13531-201ENSMUST00000121893 543 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Gm13669-201ENSMUST00000122366 457 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Gm24103-201ENSMUST00000174930 77 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Gm29124-201ENSMUST00000186576 452 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Gm9127-201ENSMUST00000188041 985 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Gm8256-203ENSMUST00000228692 591 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Olfr1153-201ENSMUST00000052300 957 ntBASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc38Q8CDN8 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Mir449c-201ENSMUST00000102192 109 ntBASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc38Q8CDN8 Gm5125-201ENSMUST00000148614 624 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms