Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm21780-201ENSMUST00000180128 498 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm21572-201ENSMUST00000180134 498 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm21529-201ENSMUST00000180175 498 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm11353-201ENSMUST00000180940 627 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm27004-201ENSMUST00000183300 727 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm4557-201ENSMUST00000185826 907 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm29370-202ENSMUST00000187476 499 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm8708-201ENSMUST00000188500 906 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm4545-201ENSMUST00000190797 603 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm37643-201ENSMUST00000195369 1260 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gabra4-203ENSMUST00000198138 440 ntTSL 2 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm31363-201ENSMUST00000199362 541 ntTSL 3 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm8479-201ENSMUST00000203825 718 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 CT025619.2-201ENSMUST00000216975 2312 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm5791-201ENSMUST00000220840 489 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim35Q8C006 AC165154.2-201ENSMUST00000227310 336 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm8849-201ENSMUST00000058951 480 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Mrgpra6-201ENSMUST00000073793 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Tmem268-202ENSMUST00000080336 3630 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 AC154314.1-201ENSMUST00000223995 2996 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Sytl4-201ENSMUST00000033608 3753 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Trim35Q8C006 Uros-201ENSMUST00000033276 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Trim35Q8C006 Unc93a-201ENSMUST00000084966 2643 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Trim35Q8C006 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trim35Q8C006 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trim35Q8C006 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Opn1sw-201ENSMUST00000080428 2410 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Trim35Q8C006 Gfpt1-201ENSMUST00000032057 2286 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Gm37443-201ENSMUST00000193458 2827 ntBASIC8.83□□□□□ -1
Trim35Q8C006 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trim35Q8C006 AC160637.1-201ENSMUST00000214037 3887 ntBASIC8.83□□□□□ -1
Trim35Q8C006 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Hnf4g-201ENSMUST00000108393 2224 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Ighv11-1-201ENSMUST00000103466 353 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim35Q8C006 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim35Q8C006 Gm24794-201ENSMUST00000104288 140 ntBASIC8.83□□□□□ -1
Trim35Q8C006 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Gm5757-201ENSMUST00000117494 528 ntBASIC8.83□□□□□ -1
Trim35Q8C006 Tma7-ps-201ENSMUST00000118448 195 ntBASIC8.83□□□□□ -1
Trim35Q8C006 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC8.83□□□□□ -1
Trim35Q8C006 4930570D08Rik-201ENSMUST00000130431 196 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Gm14947-201ENSMUST00000133704 303 ntBASIC8.83□□□□□ -1
Trim35Q8C006 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC8.83□□□□□ -1
Trim35Q8C006 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC8.83□□□□□ -1
Trim35Q8C006 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC8.83□□□□□ -1
Trim35Q8C006 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Gm24298-201ENSMUST00000158299 60 ntBASIC8.83□□□□□ -1
Trim35Q8C006 Gm15841-201ENSMUST00000160540 517 ntTSL 3 BASIC8.83□□□□□ -1
Trim35Q8C006 Sla-204ENSMUST00000168522 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Gm20492-201ENSMUST00000172591 286 ntTSL 3 BASIC8.83□□□□□ -1
Trim35Q8C006 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Gm19637-201ENSMUST00000185933 579 ntBASIC8.83□□□□□ -1
Trim35Q8C006 Gm29371-201ENSMUST00000186823 885 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Gm19641-201ENSMUST00000188432 417 ntBASIC8.83□□□□□ -1
Trim35Q8C006 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC8.83□□□□□ -1
Trim35Q8C006 Gm9775-201ENSMUST00000189402 331 ntBASIC8.83□□□□□ -1
Trim35Q8C006 Gm37539-201ENSMUST00000192644 235 ntBASIC8.83□□□□□ -1
Trim35Q8C006 Gm34727-201ENSMUST00000195175 529 ntBASIC8.83□□□□□ -1
Trim35Q8C006 Gm44790-201ENSMUST00000204137 798 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Trim35Q8C006 Gm29754-201ENSMUST00000206269 358 ntBASIC8.83□□□□□ -1
Trim35Q8C006 AC167017.1-201ENSMUST00000214975 412 ntBASIC8.83□□□□□ -1
Trim35Q8C006 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Gm4263-202ENSMUST00000221392 667 ntBASIC8.83□□□□□ -1
Trim35Q8C006 AC138667.1-201ENSMUST00000225472 316 ntBASIC8.83□□□□□ -1
Trim35Q8C006 1700012A03Rik-201ENSMUST00000031778 918 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Tyrobp-201ENSMUST00000032800 564 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim35Q8C006 Gm10237-201ENSMUST00000078393 273 ntBASIC8.83□□□□□ -1
Trim35Q8C006 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 CR974429.2-201ENSMUST00000221883 1696 ntBASIC8.83□□□□□ -1
Trim35Q8C006 Olfr1312-202ENSMUST00000213582 2891 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trim35Q8C006 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC8.83□□□□□ -1
Trim35Q8C006 Cd4-201ENSMUST00000024044 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Gatad2b-201ENSMUST00000049382 1906 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim35Q8C006 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trim35Q8C006 Gm37873-201ENSMUST00000194571 2280 ntBASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms