Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm11826-201ENSMUST00000118781 438 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm14601-201ENSMUST00000120892 236 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Mir3110-201ENSMUST00000175053 80 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm43444-201ENSMUST00000198123 291 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm45525-201ENSMUST00000210800 389 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Mir449a-201ENSMUST00000083641 91 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm25758-201ENSMUST00000103987 129 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm24429-201ENSMUST00000104076 132 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm14472-201ENSMUST00000119815 282 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm28429-201ENSMUST00000188521 363 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm18717-201ENSMUST00000192744 1241 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm29813-201ENSMUST00000195856 447 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nup98Q6PFD9 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gm15501-202ENSMUST00000140687 625 ntBASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Mir6417-201ENSMUST00000183815 116 ntBASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gm42776-201ENSMUST00000198031 406 ntBASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gm44683-201ENSMUST00000209088 484 ntBASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gm20368-201ENSMUST00000220716 301 ntBASIC6.72□□□□□ -1.33
Nup98Q6PFD9 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup98Q6PFD9 Gm43130-201ENSMUST00000197721 3907 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms