Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.38□□□□□ -1.39
Znf48Q3US17 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Znf48Q3US17 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Znf48Q3US17 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Znf48Q3US17 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Znf48Q3US17 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Znf48Q3US17 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Znf48Q3US17 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Znf48Q3US17 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm37403-201ENSMUST00000193775 3521 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm19035-201ENSMUST00000193299 1742 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Sp100-210ENSMUST00000147552 1597 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Znf48Q3US17 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 R3hdm1-208ENSMUST00000187900 3982 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm24935-201ENSMUST00000103770 110 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm24334-201ENSMUST00000104210 128 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm12186-201ENSMUST00000119050 945 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm9308-201ENSMUST00000119073 448 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm15231-201ENSMUST00000119174 447 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm13500-201ENSMUST00000119348 824 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm6591-201ENSMUST00000121063 434 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm11438-201ENSMUST00000121582 189 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm25902-201ENSMUST00000158493 318 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm24875-201ENSMUST00000158888 104 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm9071-201ENSMUST00000165915 474 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm20519-201ENSMUST00000173684 359 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm28894-201ENSMUST00000185214 615 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm8307-201ENSMUST00000187682 1150 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm28080-201ENSMUST00000188552 722 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm29517-201ENSMUST00000190744 351 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm37369-201ENSMUST00000194179 615 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm37432-201ENSMUST00000195294 341 ntTSL 2 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm43387-201ENSMUST00000196896 1066 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm5660-201ENSMUST00000197453 1149 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm44060-201ENSMUST00000204440 410 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm44923-201ENSMUST00000206673 85 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm45506-201ENSMUST00000211620 280 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm19056-201ENSMUST00000218220 797 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm46234-201ENSMUST00000218702 259 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm2436-201ENSMUST00000219562 774 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm5173-201ENSMUST00000219616 950 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm8153-201ENSMUST00000219844 952 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.37□□□□□ -1.39
Znf48Q3US17 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm4263-202ENSMUST00000221392 667 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 AC207128.2-202ENSMUST00000224010 808 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 AC105407.3-201ENSMUST00000224161 648 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 AC133598.2-201ENSMUST00000224302 624 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Znf48Q3US17 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC6.37□□□□□ -1.39
Znf48Q3US17 n-R5s37-201ENSMUST00000082533 118 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm25859-201ENSMUST00000083710 91 ntBASIC6.37□□□□□ -1.39
Znf48Q3US17 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Dnajc28-204ENSMUST00000169982 3535 ntAPPRIS P4 TSL 2 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Znf48Q3US17 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Znf48Q3US17 Gm38300-201ENSMUST00000194245 1870 ntBASIC6.36□□□□□ -1.39
Znf48Q3US17 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms