Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 AC118639.1-203ENSMUST00000228425 2016 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm26078-201ENSMUST00000104067 128 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm22592-201ENSMUST00000104242 131 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm25564-201ENSMUST00000104604 132 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm7927-201ENSMUST00000118818 880 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm11481-201ENSMUST00000120069 255 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm12293-201ENSMUST00000121898 590 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm22959-201ENSMUST00000122514 303 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm25826-201ENSMUST00000157090 137 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm24216-201ENSMUST00000158259 117 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm26211-201ENSMUST00000158578 129 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm25489-201ENSMUST00000158727 141 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm44243-201ENSMUST00000204323 692 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm44795-201ENSMUST00000205496 319 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.11□□□□□ -1.59
Nkx3-1P97436 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Nkx3-1P97436 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm24230-201ENSMUST00000104313 129 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm9836-201ENSMUST00000117132 216 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm14106-201ENSMUST00000119382 438 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm4914-201ENSMUST00000119757 459 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm15786-201ENSMUST00000121079 450 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm12650-201ENSMUST00000121966 258 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Mir3110-201ENSMUST00000175053 80 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms