Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC4.57□□□□□ -1.68
Sssca1P56873 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sssca1P56873 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sssca1P56873 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sssca1P56873 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC4.57□□□□□ -1.68
Sssca1P56873 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC4.57□□□□□ -1.68
Sssca1P56873 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sssca1P56873 Gm43148-201ENSMUST00000198237 520 ntBASIC4.57□□□□□ -1.68
Sssca1P56873 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC4.57□□□□□ -1.68
Sssca1P56873 Gm44539-201ENSMUST00000206010 238 ntBASIC4.57□□□□□ -1.68
Sssca1P56873 Gm18255-201ENSMUST00000211316 765 ntBASIC4.57□□□□□ -1.68
Sssca1P56873 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC4.57□□□□□ -1.68
Sssca1P56873 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sssca1P56873 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sssca1P56873 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.57□□□□□ -1.68
Sssca1P56873 AC135292.2-201ENSMUST00000227559 367 ntBASIC4.57□□□□□ -1.68
Sssca1P56873 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sssca1P56873 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Sssca1P56873 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sssca1P56873 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sssca1P56873 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Sssca1P56873 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
Sssca1P56873 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sssca1P56873 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC4.57□□□□□ -1.68
Sssca1P56873 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.57□□□□□ -1.68
Sssca1P56873 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sssca1P56873 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC4.56□□□□□ -1.68
Sssca1P56873 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Sssca1P56873 Gm7919-201ENSMUST00000202043 1389 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Sssca1P56873 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sssca1P56873 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sssca1P56873 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 Gm22284-201ENSMUST00000104132 132 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 Gm11624-201ENSMUST00000118579 1041 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Gm11369-201ENSMUST00000120812 318 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Gm13899-201ENSMUST00000121519 1255 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC4.56□□□□□ -1.68
Sssca1P56873 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 Gm26106-201ENSMUST00000157254 228 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Gm26170-201ENSMUST00000158419 148 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Gm16298-201ENSMUST00000161107 420 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
Sssca1P56873 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Sssca1P56873 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC4.56□□□□□ -1.68
Sssca1P56873 Mir7011-201ENSMUST00000183768 73 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC4.56□□□□□ -1.68
Sssca1P56873 Gm38177-201ENSMUST00000192213 1040 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Gm31306-201ENSMUST00000197517 508 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Gm9278-201ENSMUST00000205508 553 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Gm19182-201ENSMUST00000207139 577 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Gm45724-201ENSMUST00000213031 420 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 AC069561.1-201ENSMUST00000213750 424 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Gm9088-201ENSMUST00000220237 508 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC4.56□□□□□ -1.68
Sssca1P56873 AC154595.2-201ENSMUST00000225067 310 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 AC166105.1-201ENSMUST00000227512 482 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 AC122937.2-201ENSMUST00000228258 1051 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC4.56□□□□□ -1.68
Sssca1P56873 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Sssca1P56873 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC4.56□□□□□ -1.68
Sssca1P56873 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC4.56□□□□□ -1.68
Sssca1P56873 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sssca1P56873 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sssca1P56873 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sssca1P56873 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sssca1P56873 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Sssca1P56873 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sssca1P56873 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sssca1P56873 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sssca1P56873 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sssca1P56873 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Sssca1P56873 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sssca1P56873 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
Sssca1P56873 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sssca1P56873 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sssca1P56873 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sssca1P56873 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
Sssca1P56873 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sssca1P56873 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Sssca1P56873 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC4.55□□□□□ -1.68
Sssca1P56873 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC4.55□□□□□ -1.68
Sssca1P56873 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms