Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC7.02□□□□□ -1.29
Sox1P53783 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Sox1P53783 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm13928-201ENSMUST00000120326 1732 ntBASIC7.01□□□□□ -1.29
Sox1P53783 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.01□□□□□ -1.29
Sox1P53783 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Sox1P53783 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm7739-201ENSMUST00000221131 1560 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Gm19031-201ENSMUST00000176280 1365 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Gm26289-201ENSMUST00000104169 131 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm13641-201ENSMUST00000117993 473 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm13224-201ENSMUST00000119586 94 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm12768-201ENSMUST00000120055 759 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm13007-201ENSMUST00000121866 365 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm22836-201ENSMUST00000158441 61 ntBASIC7.01□□□□□ -1.29
Sox1P53783 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm9597-201ENSMUST00000171913 602 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Gm24465-201ENSMUST00000178398 107 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Gm27024-201ENSMUST00000182561 755 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm18700-201ENSMUST00000185791 553 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Ighv1-3-201ENSMUST00000192764 302 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC7.01□□□□□ -1.29
Sox1P53783 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm19617-201ENSMUST00000202977 308 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms