Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm7496-201ENSMUST00000192573 1034 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cux1P53564 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Cux1P53564 AC165347.1-201ENSMUST00000224089 1025 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Zfp429-203ENSMUST00000224684 524 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC8.85□□□□□ -0.99
Cux1P53564 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC8.85□□□□□ -0.99
Cux1P53564 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Cux1P53564 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC8.85□□□□□ -0.99
Cux1P53564 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cux1P53564 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Cux1P53564 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC8.85□□□□□ -0.99
Cux1P53564 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cux1P53564 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC8.85□□□□□ -0.99
Cux1P53564 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cux1P53564 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.85□□□□□ -0.99
Cux1P53564 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cux1P53564 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cux1P53564 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Cux1P53564 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cux1P53564 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cux1P53564 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cux1P53564 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cux1P53564 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cux1P53564 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cux1P53564 Gm2199-201ENSMUST00000119065 874 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Gm14620-201ENSMUST00000120656 383 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Gm11507-201ENSMUST00000156462 412 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cux1P53564 Gm27039-201ENSMUST00000182438 962 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Gm28976-201ENSMUST00000188070 144 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC8.85□□□□□ -0.99
Cux1P53564 Gm43712-201ENSMUST00000198020 291 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC8.85□□□□□ -0.99
Cux1P53564 Gm17984-201ENSMUST00000205286 859 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Gm5027-201ENSMUST00000206700 375 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Cux1P53564 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cux1P53564 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cux1P53564 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC8.84□□□□□ -0.99
Cux1P53564 AC156636.1-201ENSMUST00000218639 2229 ntBASIC8.84□□□□□ -0.99
Cux1P53564 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC8.84□□□□□ -0.99
Cux1P53564 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cux1P53564 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cux1P53564 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Cux1P53564 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC8.84□□□□□ -0.99
Cux1P53564 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cux1P53564 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC8.84□□□□□ -0.99
Cux1P53564 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cux1P53564 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cux1P53564 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cux1P53564 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cux1P53564 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Cux1P53564 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cux1P53564 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cux1P53564 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC8.84□□□□□ -0.99
Cux1P53564 Gm24735-201ENSMUST00000158859 118 ntBASIC8.84□□□□□ -0.99
Cux1P53564 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cux1P53564 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC8.84□□□□□ -0.99
Cux1P53564 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cux1P53564 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cux1P53564 Gm17981-201ENSMUST00000191109 739 ntBASIC8.84□□□□□ -0.99
Cux1P53564 Ighv3-2-201ENSMUST00000191842 349 ntBASIC8.84□□□□□ -0.99
Cux1P53564 Gm37215-201ENSMUST00000194927 1259 ntBASIC8.84□□□□□ -0.99
Cux1P53564 Gm2053-201ENSMUST00000195671 631 ntBASIC8.84□□□□□ -0.99
Cux1P53564 Gm43467-201ENSMUST00000197441 437 ntBASIC8.84□□□□□ -0.99
Cux1P53564 Clec2j-202ENSMUST00000203658 606 ntBASIC8.84□□□□□ -0.99
Cux1P53564 Gm18215-201ENSMUST00000204429 798 ntBASIC8.84□□□□□ -0.99
Cux1P53564 Gm18541-201ENSMUST00000215935 538 ntBASIC8.84□□□□□ -0.99
Cux1P53564 AC164567.4-201ENSMUST00000219708 483 ntBASIC8.84□□□□□ -0.99
Cux1P53564 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Cux1P53564 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Cux1P53564 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Cux1P53564 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Cux1P53564 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cux1P53564 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC8.84□□□□□ -1
Cux1P53564 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 AC115289.2-201ENSMUST00000223836 2803 ntBASIC8.83□□□□□ -1
Cux1P53564 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 Gm15741-201ENSMUST00000119401 754 ntBASIC8.83□□□□□ -1
Cux1P53564 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC8.83□□□□□ -1
Cux1P53564 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC8.83□□□□□ -1
Cux1P53564 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC8.83□□□□□ -1
Cux1P53564 Gm20545-201ENSMUST00000174739 210 ntBASIC8.83□□□□□ -1
Cux1P53564 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC8.83□□□□□ -1
Cux1P53564 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
Cux1P53564 Mir7687-201ENSMUST00000184722 59 ntBASIC8.83□□□□□ -1
Cux1P53564 Gm42502-201ENSMUST00000198550 1089 ntBASIC8.83□□□□□ -1
Cux1P53564 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 Gm8290-201ENSMUST00000218202 477 ntBASIC8.83□□□□□ -1
Cux1P53564 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms