Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm25675-201ENSMUST00000174979 118 ntBASIC4.67□□□□□ -1.66
Sdc1P18828 Gm22650-201ENSMUST00000175138 105 ntBASIC4.67□□□□□ -1.66
Sdc1P18828 Mir3072-201ENSMUST00000175610 83 ntBASIC4.67□□□□□ -1.66
Sdc1P18828 Gm27360-201ENSMUST00000183487 80 ntBASIC4.67□□□□□ -1.66
Sdc1P18828 Gm28580-201ENSMUST00000186767 88 ntBASIC4.67□□□□□ -1.66
Sdc1P18828 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Sdc1P18828 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC4.67□□□□□ -1.66
Sdc1P18828 Gm18482-201ENSMUST00000202405 760 ntBASIC4.67□□□□□ -1.66
Sdc1P18828 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Sdc1P18828 Gm45127-201ENSMUST00000205984 1015 ntBASIC4.67□□□□□ -1.66
Sdc1P18828 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC4.67□□□□□ -1.66
Sdc1P18828 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.67□□□□□ -1.66
Sdc1P18828 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Sdc1P18828 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sdc1P18828 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC4.67□□□□□ -1.66
Sdc1P18828 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Sdc1P18828 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sdc1P18828 Gm44586-201ENSMUST00000207166 2737 ntBASIC4.67□□□□□ -1.66
Sdc1P18828 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Sdc1P18828 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sdc1P18828 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.67□□□□□ -1.66
Sdc1P18828 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Sdc1P18828 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sdc1P18828 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sdc1P18828 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Sdc1P18828 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Sdc1P18828 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sdc1P18828 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sdc1P18828 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC4.67□□□□□ -1.66
Sdc1P18828 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sdc1P18828 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Sdc1P18828 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Sdc1P18828 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Sdc1P18828 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Sdc1P18828 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Sdc1P18828 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm14769-201ENSMUST00000118590 432 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Sdc1P18828 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Sdc1P18828 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm25180-201ENSMUST00000157746 115 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Sdc1P18828 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm8826-201ENSMUST00000193161 948 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 Gm42782-201ENSMUST00000197286 522 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Sdc1P18828 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC4.66□□□□□ -1.66
Sdc1P18828 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC4.66□□□□□ -1.66
Sdc1P18828 AC155270.1-202ENSMUST00000221503 352 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 AC164597.1-201ENSMUST00000226538 514 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 CT010453.2-201ENSMUST00000227005 483 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 AC123533.2-201ENSMUST00000228176 375 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 AC154563.1-201ENSMUST00000228317 442 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sdc1P18828 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm24041-201ENSMUST00000083115 156 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.66□□□□□ -1.66
Sdc1P18828 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Sdc1P18828 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm45793-201ENSMUST00000207900 1342 ntBASIC4.66□□□□□ -1.66
Sdc1P18828 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC4.66□□□□□ -1.66
Sdc1P18828 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sdc1P18828 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Sdc1P18828 Gm14857-201ENSMUST00000117862 3185 ntBASIC4.65□□□□□ -1.66
Sdc1P18828 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Sdc1P18828 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Sdc1P18828 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Sdc1P18828 Gm38351-201ENSMUST00000195466 2518 ntBASIC4.65□□□□□ -1.66
Sdc1P18828 Gm22661-201ENSMUST00000104192 132 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Gm24790-201ENSMUST00000104285 132 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Gm11858-201ENSMUST00000117935 838 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Gm7058-201ENSMUST00000119209 902 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Gm13077-201ENSMUST00000121941 484 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.65□□□□□ -1.67
Sdc1P18828 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms