Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm38147-201ENSMUST00000192397 1798 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm12187-201ENSMUST00000119584 1375 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm43917-201ENSMUST00000191984 2360 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 AC061963.2-201ENSMUST00000213541 2739 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm37877-201ENSMUST00000191630 2709 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Hoxd3P09027 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC6.01□□□□□ -1.45
Hoxd3P09027 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm26396-201ENSMUST00000104093 132 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm23484-201ENSMUST00000104178 131 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm14575-201ENSMUST00000117210 560 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm11558-201ENSMUST00000118454 459 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm13680-201ENSMUST00000119790 793 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm15192-201ENSMUST00000121005 293 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm12632-201ENSMUST00000121223 495 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm13220-201ENSMUST00000121535 508 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC6.01□□□□□ -1.45
Hoxd3P09027 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm23501-201ENSMUST00000157744 256 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm25451-201ENSMUST00000177832 121 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm22911-201ENSMUST00000177920 107 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm4832-201ENSMUST00000182679 399 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Mir8099-2-201ENSMUST00000183568 127 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Mir8099-1-201ENSMUST00000184238 127 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm37270-201ENSMUST00000194277 330 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm19172-201ENSMUST00000203170 1246 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm44245-201ENSMUST00000204304 232 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm18484-201ENSMUST00000204389 991 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm45189-201ENSMUST00000208567 363 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm18226-201ENSMUST00000215261 521 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm7392-201ENSMUST00000217815 345 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 AC153924.1-201ENSMUST00000220117 312 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm6171-201ENSMUST00000220760 645 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm46317-201ENSMUST00000221103 393 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 AC154552.4-201ENSMUST00000222171 151 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 AC124397.1-201ENSMUST00000224296 653 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 AC163038.4-201ENSMUST00000224942 474 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 AC126939.4-201ENSMUST00000225360 743 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 AC154640.2-201ENSMUST00000226324 472 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Hoxd3P09027 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm25859-201ENSMUST00000083710 91 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms