Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm43779-201ENSMUST00000196691 829 ntBASIC6.14□□□□□ -1.43
TnfP06804 Gm43516-201ENSMUST00000196891 322 ntBASIC6.14□□□□□ -1.43
TnfP06804 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TnfP06804 Gm42652-201ENSMUST00000199073 614 ntBASIC6.14□□□□□ -1.43
TnfP06804 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.14□□□□□ -1.43
TnfP06804 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.14□□□□□ -1.43
TnfP06804 Gm5735-201ENSMUST00000207053 167 ntBASIC6.14□□□□□ -1.43
TnfP06804 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC6.14□□□□□ -1.43
TnfP06804 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC6.14□□□□□ -1.43
TnfP06804 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.14□□□□□ -1.43
TnfP06804 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.14□□□□□ -1.43
TnfP06804 Gm9202-201ENSMUST00000223036 437 ntBASIC6.14□□□□□ -1.43
TnfP06804 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.14□□□□□ -1.43
TnfP06804 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.14□□□□□ -1.43
TnfP06804 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
TnfP06804 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TnfP06804 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
TnfP06804 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
TnfP06804 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TnfP06804 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
TnfP06804 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
TnfP06804 Gm17165-201ENSMUST00000096155 493 ntBASIC6.14□□□□□ -1.43
TnfP06804 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TnfP06804 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
TnfP06804 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
TnfP06804 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
TnfP06804 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
TnfP06804 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TnfP06804 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
TnfP06804 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TnfP06804 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TnfP06804 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TnfP06804 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TnfP06804 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
TnfP06804 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.14□□□□□ -1.43
TnfP06804 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
TnfP06804 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.13□□□□□ -1.43
TnfP06804 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TnfP06804 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.13□□□□□ -1.43
TnfP06804 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.13□□□□□ -1.43
TnfP06804 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TnfP06804 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TnfP06804 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TnfP06804 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TnfP06804 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.13□□□□□ -1.43
TnfP06804 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
TnfP06804 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TnfP06804 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
TnfP06804 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.13□□□□□ -1.43
TnfP06804 Gm14220-201ENSMUST00000118114 449 ntBASIC6.13□□□□□ -1.43
TnfP06804 Gm4989-201ENSMUST00000118711 749 ntBASIC6.13□□□□□ -1.43
TnfP06804 Gm12303-201ENSMUST00000119506 673 ntBASIC6.13□□□□□ -1.43
TnfP06804 Gm15044-201ENSMUST00000120703 598 ntBASIC6.13□□□□□ -1.43
TnfP06804 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.13□□□□□ -1.43
TnfP06804 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TnfP06804 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.13□□□□□ -1.43
TnfP06804 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6.13□□□□□ -1.43
TnfP06804 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.13□□□□□ -1.43
TnfP06804 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Gm38015-201ENSMUST00000193048 188 ntBASIC6.13□□□□□ -1.43
TnfP06804 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.13□□□□□ -1.43
TnfP06804 Gm43054-201ENSMUST00000199495 884 ntBASIC6.13□□□□□ -1.43
TnfP06804 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
TnfP06804 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.13□□□□□ -1.43
TnfP06804 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Rybp-ps-201ENSMUST00000069489 681 ntBASIC6.13□□□□□ -1.43
TnfP06804 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.13□□□□□ -1.43
TnfP06804 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TnfP06804 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.13□□□□□ -1.43
TnfP06804 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TnfP06804 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
TnfP06804 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.13□□□□□ -1.43
TnfP06804 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.12□□□□□ -1.43
TnfP06804 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
TnfP06804 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.12□□□□□ -1.43
TnfP06804 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TnfP06804 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.12□□□□□ -1.43
TnfP06804 Gm11908-201ENSMUST00000117755 347 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm8061-201ENSMUST00000122380 350 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.12□□□□□ -1.43
TnfP06804 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TnfP06804 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms